FIND specifications

Information


Unique identifier OMICS_28517
Name FIND
Alternative name difFerential chromatin INteractions Detection
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License GNU General Public License version 3.0
Computer skills Advanced
Version 0.99
Stability Stable
Requirements
Rcpp, RcppEigen, Matrix, bigmemory, HiTC, zlibbioc, data.table, doParallel, quantreg, png
Maintained Yes

Versioning


No version available

Maintainers


  • person_outline nadhir
  • person_outline Michael Zhang
  • person_outline Yang Chen

Publication for difFerential chromatin INteractions Detection

FIND institution(s)
MOE Key Laboratory of Bioinformatics and Bioinformatics Division, Center for Synthetic and System Biology, TNLIST/Department of Automation, Tsinghua University, Beijing, China; Department of Molecular and Cell Biology, Center for Systems Biology, The University of Texas, Dallas, Richardson, TX, USA
FIND funding source(s)
Supported by the National Basic Research Program of China (2017YFA0505503), the National Natural Science Foundation of China (91729301, 31671384, 31301044, and 81630103), and Tsinghua National Laboratory for Information Science and Technology Cross-Discipline Foundation.

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