FINDMITE specifications

Information


Unique identifier OMICS_28860
Name FINDMITE
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages C
Computer skills Advanced
Maintained No

Versioning


No version available

Maintainer


This tool is not available anymore.

Additional information


Available upon request.

Publication for FINDMITE

FINDMITE citation

library_books

Characterization of a Group of MITEs with Unusual Features from Two Coral Genomes

2010
PLoS One
PMCID: 2872659
PMID: 20502527
DOI: 10.1371/journal.pone.0010700

[…] CMITEs may result from ascertainment bias, since the internal region was used as query to search for the majority of CMITEs. However, there was no such bias while initially detecting CMITEs using the FINDMITE program since it was based on TIR similarity only. It is tempting to speculate that the internal region is somehow important for CMITEs' transposition. Indeed, a recent study has shown that s […]

FINDMITE institution(s)
Department of Biochemistry, Virginia Polytechnic Institute and State University, Blacksburg, VA, USA
FINDMITE funding source(s)
Supported by National Institutes of Health Grant AI42121 and by the Agricultural Experimental Station at Virginia Tech.

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