firehose_get pipeline

firehose_get specifications

Information


Unique identifier OMICS_19000
Name firehose_get
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Computer skills Advanced
Version 0.4.8
Stability Stable
Maintained Yes

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  • person_outline Michael Noble <>

firehose_get citation

2018
PMCID: 5766238

[…] snpdensity(r)=∑i#(snpiinri)∑ilength(ri), illumina infinium human dna methylation 450 level 3 data were downloaded from the broad tcga gdac (http://gdac.broadinstitute.org) using firehose_get. the coordinates of the methylation sites (hg18) were converted into hg38 using the ucsc liftover and further intersected with that of the core promoters (hg38). for each gene, […]

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