Fit3D statistics

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Associated diseases

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Fit3D specifications

Information


Unique identifier OMICS_10792
Name Fit3D
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Maintained Yes

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Maintainer


  • person_outline Florian Kaiser <>

Information


Unique identifier OMICS_10792
Name Fit3D
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
Maintained Yes

Maintainer


  • person_outline Florian Kaiser <>

Publication for Fit3D

Fit3D in publications

 (3)
PMCID: 5919687
PMID: 29659563
DOI: 10.1371/journal.pcbi.1006101

[…] database. in total, 32 mutagenesis sites and 8 natural variants were retrieved., all motif occurrences in m1 and m2 representative chains were aligned in respect to their backbone atoms () using the fit3d algorithm []. additionally, the alpha carbon distances and the angle between side chains were determined. the side chain angle θ between two residues was calculated by abstracting each side […]

PMCID: 5495384
PMID: 28672039
DOI: 10.1371/journal.pone.0180201

[…] [], whereas pepper et al. found a mean difference of 0.2 l in middle-aged women using a rotary laser scanning system developed by their research group []. in contrast, analyses from ng et al. with a fit3d proscanner resulted in a 4.2 l (95% ci: −5.13; −3.17) smaller bv measured by 3dps compared to adp []. differences in the bv measurement agreement between 3dps and adp among the different […]

PMCID: 3117356
PMID: 21685102
DOI: 10.1093/bioinformatics/btr249

[…] 1dirichlet prior is a conjugate prior of multinomial distribution., dataset and tools: we thank rachel for providing us the protein structure dataset and fragment libraries and arun konagurthu for fit3d code which matches a fragment with protein structure in 3d space., funding: innovative young biotechnologist award grant 2008 from department of biotechnology, government of india (to a.v.t.)., […]


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Fit3D institution(s)
Department of Applied Computer and Biosciences, University of Applied Sciences Mittweida, Mittweida, Germany

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