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FlaiMapper specifications

Information


Unique identifier OMICS_06047
Name FlaiMapper
Alternative name Fragment Location Annotation Identification Mapper
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Python
License GNU General Public License version 2.0
Computer skills Advanced
Stability Stable
Maintained Yes

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Documentation


Publication for Fragment Location Annotation Identification Mapper

FlaiMapper in publication

PMCID: 5029740
PMID: 27015120
DOI: 10.18632/oncotarget.8293

[…] the nap group was 83-fold higher than the average of all other mtrna read counts., in order to quantify the expression of trfs, we assembled a pca trf-database using the fragment detection algorithm flaimapper []. the read-coverage of mature cytoplasmic trnas across all groups was analyzed using clc-bio genomics workbench. initially, 1175 trfs were identified and mapped to 386 unique cytosolic […]

FlaiMapper institution(s)
Department of Urology, Erasmus University Medical Center, CA, Rotterdam, Netherlands

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