FLAME specifications

Information


Unique identifier OMICS_05622
Name FLAME
Alternative name FLow analysis with Automated Multivariate Estimation
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
Computer skills Advanced
Stability Stable
Maintained Yes

Versioning


No version available

Publication for FLow analysis with Automated Multivariate Estimation

FLAME citations

 (2)
library_books

Hierarchical Modeling for Rare Event Detection and Cell Subset Alignment across Flow Cytometry Samples

2013
PLoS Comput Biol
PMCID: 3708855
PMID: 23874174
DOI: 10.1371/journal.pcbi.1003130

[…] and does not appear to either provide a statistical model (e.g. for goodness-of-fit calculations) or methods for alignment of cell subsets across different samples. In contrast, flowClust and FLAME (FLow analysis with Automated Multivariate Estimation) both use a statistical mixture model approach for density estimation and clustering. Both packages are likely to be widely used, since flowClust […]

library_books

FIND: A new software tool and development platform for enhanced multicolor flow analysis

2011
BMC Bioinformatics
PMCID: 3119067
PMID: 21569257
DOI: 10.1186/1471-2105-12-145

[…] FlowJo http://www.flowjo.com FCS Express http://www.denovosoftware.com Massively Multiparametric Mass Cytometer Analyzer Project http://www.stemspec.ca FLAME: FLow analysis with Automated Multivariate Estimation http://www.broadinstitute.org/cancer/software/genepattern/modules/FLAME RPy http://rpy.sourceforge.net SciPy and NumPy http://www.scipy.org B […]

FLAME institution(s)
Broad Institute of MIT and Harvard, Cambridge MA, USA

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