Flapjack protocols

Flapjack specifications


Unique identifier OMICS_05308
Name Flapjack
Software type Package/Module
Interface Graphical user interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Computer skills Medium
Stability Stable
Maintained Yes


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Publication for Flapjack

Flapjack IN pipelines

PMCID: 5912076
PMID: 29688387
DOI: 10.1093/database/bay037

[…] representations provide quicker interpretation of information., when it comes to displaying snp diversity, several powerful desktop software applications already exist, most notably tassel (6) and flapjack (7), but stand-alone web-based visualization tools that can be easily implemented at web-based biological databases are not common, and snps are usually displayed through genome browsers […]

PMCID: 5485006
PMID: 28261921
DOI: 10.1111/mec.14084

[…] and a. montbretiana were used as control. all primers were designed using the program primer3 (rozen & skaletsky 2000). for the introgression lines, genotypes were plotted using the program flapjack (milne et al. 2010)., all calculations on (average) evolutionary divergence of sequences of the first intron of the flc orthologue from a. alpina acc pajares and a. montbretiana […]

Flapjack institution(s)
Genetics Programme, Scottish Crop Research Institute, Invergowrie, Dundee, UK

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