flexImaging protocols

View flexImaging computational protocol

flexImaging statistics

To access cutting-edge analytics on consensus tools, life science contexts and associated fields, you will need to subscribe to our premium service.

Subscribe
info

Citations per year

Citations chart
info

Popular tool citations

chevron_left Morphometric analysis Image mapping Image signal quantification Image reconstruction chevron_right
Popular tools chart
info

Tool usage distribution map

Tool usage distribution map
info

Associated diseases

Associated diseases

flexImaging specifications

Information


Unique identifier OMICS_05684
Name flexImaging
Software type Toolkit/Suite
Interface Graphical user interface
Restrictions to use License purchase required
Operating system Unix/Linux
License Commercial
Computer skills Medium
Stability Stable
Maintained Yes

Versioning


Add your version

flexImaging in pipeline

2017
PMCID: 5709746
PMID: 29054837
DOI: 10.15252/emmm.201707729

[…] the present data, since all isotopic compounds were simultaneously present in the mix, oxidation reactions cannot be excluded, which may explain differences in gssg values. data were treated with fleximaging 4.0 (bruker, germany), proprietary softwares quantinetix™ 1.7, and multimaging™ 1.0.30 (imabiotech, loos, france)., lc‐ms analysis was run on snap‐frozen tissue of six pdx samples and 13 […]


To access a full list of citations, you will need to upgrade to our premium service.

flexImaging in publications

 (138)
PMCID: 5934395
PMID: 29725040
DOI: 10.1038/s41598-018-25088-2

[…] and metabolites were ionized/desorbed using a 100-µm raster step size with a smartbeam ii laser (2 khz, 200 shots/pixel) and 16,000 resolution (fwhm) at m/z 400. the raw msi data were analysed using fleximaging 4.1 (bruker daltonics, bremen, germany), transformed into an imzml file and processed using cyclobranch., an analyte g2 la unit (photon machines, redmont, usa) equipped with an arf […]

PMCID: 5906754
PMID: 29570976
DOI: 10.1021/acs.analchem.7b05215

[…] annotation of steatotic regions, inflammation areas, and portal sclerosis., several data analysis strategies were applied, as schematically represented in ., the raw maldi-tof data was loaded into fleximaging software v.4.1 (bruker daltonik gmbh, bremen, germany), where the msi image was semiautomatically overlaid (using fiducial markers) with a histological optical image of the same tissue […]

PMCID: 5891190
PMID: 29427339
DOI: 10.1111/cas.13529

[…] set to obtain the highest sensitivity with m/z values in the range of 200‐1000 in the negative‐ion mode. the automatic acquisition of spectra and reconstruction of ion images were performed using fleximaging software (bruker daltonics)., the human hcc cell lines huh7 and hepg2 were maintained in dmem (invitrogen, carlsbad, ca, usa) with 10% fbs, 100 u penicillin, and 0.1 mg/ml streptomycin […]

PMCID: 5827415
PMID: 29520235
DOI: 10.3389/fphar.2018.00141

[…] acquiring in the 20–500 da mass range and summing 2000 laser shots per raster position. for analyses of the fragmentation of the parent ion measurements were made in lift ms/ms mode. the resulting fleximaging 4.1 (bruker daltonics, bremen, germany) files, containing the acquired spectra from the measurement regions, were imported into scils lab 2017a software (bremen, germany) for subsequent […]

PMCID: 5803191
PMID: 29416059
DOI: 10.1038/s41598-018-20793-4

[…] mass spectrometer (bruker daltonics, bremen, germany) with maldi ionisation and at 20 µm spatial resolution. spectra were collected in the m/z range of 150–2000. ft-icr data were read into fleximaging v4.1 (bruker daltonics, bremen, germany) and normalised using the root mean square method. peak centroids were taken as accurate masses to facilitate the assignment of lipid identities., […]


To access a full list of publications, you will need to upgrade to our premium service.

flexImaging reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review flexImaging