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flNeuronTool specifications


Unique identifier OMICS_10434
Name flNeuronTool
Software type Package/Module
Interface Graphical user interface
Restrictions to use None
Operating system Unix/Linux
Programming languages C++, MATLAB
License GNU General Public License version 2.0
Computer skills Medium
Stability Stable
Maintained Yes


No version available



  • person_outline Qian Liu <>

Publication for flNeuronTool

flNeuronTool citation


Precise Cerebral Vascular Atlas in Stereotaxic Coordinates of Whole Mouse Brain

PMCID: 5742197
PMID: 29311856
DOI: 10.3389/fnana.2017.00128

[…] 3d with neuronstudio software (wearne et al., ; rodriguez et al., ), and the traced results were saved in .swc (cannon et al., ) format. ultimately, the vectorized results were edited manually with flneurontool (ming et al., ) to correct for discontinuous and redundant vascular branches., tracing cortical penetrating vessels and distinguishing them as arteries or veins required connecting paths […]

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flNeuronTool institution(s)
Britton Chance Center for Biomedical Photonics, Huazhong University of Science and Technology - Wuhan National Laboratory for Optoelectronics, Wuhan, China; MoE Key Laboratory of Biomedical Photonics, Department of Biomedical Engineering, Huazhong University of Science and Technology, Wuhan, China

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