FluxViz specifications

Information


Unique identifier OMICS_05187
Name FluxViz
Software type Package/Module
Interface Graphical user interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages Java
Computer skills Medium
Stability Stable
Requirements
Cytoscape
Maintained Yes

Versioning


No version available

Publication for FluxViz

FluxViz citations

 (2)
library_books

Computational Approaches for Microalgal Biofuel Optimization: A Review

2014
Biomed Res Int
PMCID: 4189764
PMID: 25309916
DOI: 10.1155/2014/649453

[…] n be used to visualize the results from FBA studies (please see Constraint Based Analysis section for information on FBA). CytoSEED [] is a Cytoscape plug-in to visualize results from the Model SEED. Fluxviz [] is another Cytoscape plug-in to visualize flux distribution in the molecular interaction network. VANTED [, ] is another data visualization and data integration tool which can be utilized a […]

library_books

FluxMap: A VANTED add on for the visual exploration of flux distributions in biological networks

2012
BMC Syst Biol
PMCID: 3403919
PMID: 22548786
DOI: 10.1186/1752-0509-6-33

[…] flux data is mapped onto a network only the FluxMap workflow comprises a flux balance validation step. With regard to visualization and exploration functionalities, it is comparable to tools such as FluxViz, fa-BINA and Omix with options for customization and interaction. In the context of advanced visualizations, FluxMap supports the representation of quality parameters such as the confidence in […]

FluxViz institution(s)
Institute of Biochemistry, Medical Faculty of the Humboldt University, Charité, Berlin, Germany

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