FMLRC specifications

Information


Unique identifier OMICS_26781
Name FMLRC
Alternative name FM-index Long Read Corrector
Software type Application/Script
Interface Command line interface
Restrictions to use None
Input data A BWT of the short-read sequencing dataset.
Biological technology Pacific Biosciences, Oxford Nanopore
Operating system Unix/Linux
Programming languages C++
License MIT License
Computer skills Advanced
Version 0.1.2
Stability Stable
Maintained Yes

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Documentation


Maintainer


  • person_outline Jeremy Wang <>

Publication for FM-index Long Read Corrector

FMLRC institution(s)
Department of Genetics, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA; Department of Computer Science, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA; Department of Biology and Integrative Program for Biological and Genome Sciences, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA
FMLRC funding source(s)
Supported in part by funding from the National Science Foundation (DEB-1457707), North Carolina Biotechnology Center (2013-MRG-1110), University Cancer Research Fund, Center for Genome Dynamics (NIGMS P50 GM076468), and Gastroenterology Basic Science Research Training Program (NIH/NIDDK T32DK007737-17S1).

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