FOLDALIGN specifications

Unique identifier:
OMICS_08111
Interface:
Command line interface
Input data:
Two RNA sequences
Output data:
FOLDALIGN outputs the best local alignment score for each pair of positions in the two sequences. This list can be further processed to produce a list of non-overlapping local alignments between the two sequences.
Programming languages:
C++
Version:
2.5.0
Maintained:
Yes
Software type:
Package/Module
Restrictions to use:
None
Input format:
FASTA
Operating system:
Unix/Linux
Computer skills:
Advanced
Stability:
Beta

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FOLDALIGN distribution

download

FOLDALIGN specifications

Unique identifier:
OMICS_08111
Restrictions to use:
None
Input format:
FASTA
Computer skills:
Basic
Stability:
Stable
Interface:
Web user interface
Input data:
Two RNA sequences
Output data:
FOLDALIGN outputs the best local alignment score for each pair of positions in the two sequences. This list can be further processed to produce a list of non-overlapping local alignments between the two sequences.
Version:
2.5.0
Maintained:
Yes

FOLDALIGN distribution

download

FOLDALIGN support

Documentation

Maintainer

  • FOLDALIGN <>
  • FOLDALIGN <>

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Credits

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Publications

Institution(s)

Center for non-coding RNA in Technology and Health, IKVH, University of Copenhagen, Denmark; Department of Computer Science, University of Brasilia, Brasília, Brazil

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