FoldIndex pipeline

FoldIndex specifications


Unique identifier OMICS_03624
Name FoldIndex
Interface Web user interface
Restrictions to use None
Input data Protein sequence
Output data Protein disorder plot or text
Output format TXT
Programming languages Javascript, Python
Database management system MySQL
Computer skills Basic
Stability Stable
Maintained Yes

Publication for FoldIndex

FoldIndex IN pipeline

PMCID: 3274520
PMID: 22347381
DOI: 10.1371/journal.pone.0030534

[…] 266–318), predicted by psipred., the prediction of disorder in the mnv-1 ns1-2 protein also occurs for the ns1-2 protein of other norovirus genogroups, including human noroviruses, as shown by the foldindex [41] predictions in fig. 2, confirming that this disordered region is not unique to murine norovirus. significant sequence divergence between related proteins is commonly observed […]

FoldIndex institution(s)
Laboratory of Bioinformatics and Protein Engineering, International Institute of Molecular and Cell Biology, Warsaw, Poland; Laboratory of Bioinformatics, Institute of Molecular Biology and Biotechnology, Faculty of Biology, Poznan, Poland
FoldIndex funding source(s)
This tool was funded by Polish Ministry of Science and Higher Education (grant NN301 190139 and POIG.02.03.00-00-003/09) and the European Union (project HealthProt, contract number 229676).

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