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FooDB specifications

Information


Unique identifier OMICS_31931
Name FooDB
Restrictions to use Academic or non-commercial use
Community driven No
Data access File download, Browse
User data submission Not allowed
Version 1.0
Maintained Yes

Publication for FooDB

FooDB citations

 (3)
library_books

Caveat Usor: Assessing Differences between Major Chemistry Databases

2018
ChemMedChem
PMCID: 5900829
PMID: 29451740
DOI: 10.1002/cmdc.201700724

[…] hth and ninth, are Otava Chemicals and LabNetwork with 3.5 and 2.8 million compounds, respectively. Sources of more chemical and biological interest include: Journal of Heterocyclic Chemistry 184579, FooDB with 16744 food ingredient compounds, Royal Society of Chemistry (abstracts) 149831, The National Compound Collection with 42 779 structures from UK Chemistry PhD theses, StreptomeDB with 3780 S […]

call_split

Bitter or not? BitterPredict, a tool for predicting taste from chemical structure

2017
Sci Rep
PMCID: 5608695
PMID: 28935887
DOI: 10.1038/s41598-017-12359-7
call_split See protocol

[…] th Schrödinger as listed in detail via Supplementary Table .The external sets used for validation are included in the Supplementary file validation.xls online.The prospective predictions on DrugBank, FooDB, ChEBI and ZINC natural products are included in Supplementary file prospective_prediction_sets.xls online and via Ambinter (http://www.ambinter.com) software website in the following links:FooD […]

library_books

Critical Assessment of Small Molecule Identification 2016: automated methods

2017
J Cheminform
PMCID: 5368104
DOI: 10.1186/s13321-017-0207-1

[…] e same as for CFM_orig.CFM-ID was also used to submit entries for Category 3, by combining the above CFM-based score with a database score (DB_SCORE). For each hit in the databases HMDB [], ChEBI [], FooDB [], DrugBank [] and a local database of plant-derived compounds, 10 was added to DB_SCORE. The CFM_retrain+DB and CFM_orig+DB submissions were formed by adding the DB_SCORE for each candidate to […]

Citations

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FooDB funding source(s)
Supported by The Metabolomics Innovation Centre (TMIC), a nationally-funded research and core facility.

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