footprintDB specifications

Information


Unique identifier OMICS_00535
Name footprintDB
Restrictions to use None
Community driven No
Data access Browse
User data submission Not allowed
Maintained Yes

Documentation


Publication for footprintDB

footprintDB citation

library_books

Large Differences in Gene Expression Responses to Drought and Heat Stress between Elite Barley Cultivar Scarlett and a Spanish Landrace

2017
Front Plant Sci
PMCID: 5410667
PMID: 28507554
DOI: 10.3389/fpls.2017.00647

[…] icance compared to the negative controls, and (ii) their matrix-scan scores compared to the scores of permuted motifs. Discovered motifs were annotated by comparison to plant regulatory motifs in the footprintDB repository (Sebastian and Contreras-Moreira, ). The highest scoring motif, in terms of footprintDB “Ncor” score, was selected as the best hit. The full report on the promoter analysis, inc […]

footprintDB institution(s)
Laboratory of Computational Biology, Department of Genetics and Plant Production, Estación Experimental de Aula Dei/CSIC, Zaragoza, Spain; Fundación ARAID, Zaragoza, Spain

footprintDB reviews

 (3)
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Anonymous user #204

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Dataset
It´s a very useful database and easy to use
Anonymous user #203's avatar image No country

Anonymous user #203

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Dataset
nice database, basic for work with transcription factors