FRalanyzer specifications

Information


Unique identifier OMICS_22507
Name FRalanyzer
Alternative name Fold Recognition alignment analyzer
Interface Web user interface
Restrictions to use None
Input data An alignment.
Input format PDB
Computer skills Basic
Stability No
Maintained No

Maintainer


This tool is not available anymore.

Publication for Fold Recognition alignment analyzer

FRalanyzer citations

 (2)
library_books

Exploring Mouse Protein Function via Multiple Approaches

2016
PLoS One
PMCID: 5112993
PMID: 27846315
DOI: 10.1371/journal.pone.0166580

[…] d used it to correct the errors in the annotation of enzymes. Some researchers have attempted to combine the sequence and structure similarity approaches to explore protein function. For example, the FRalanyzer [] uses sequence-structure alignments to elucidate protein function.Recently, a large body of protein-protein interaction networks has become available to explore the functional relationshi […]

library_books

Structural and functional insights into Mimivirus ORFans

2007
BMC Genomics
PMCID: 1876218
PMID: 17490476
DOI: 10.1186/1471-2164-8-115

[…] and conservation of functionally important residues (e.g. residues involved in catalytic activity, in binding to ligands, DNA or other proteins). To aid in the analysis, we developed a new automated Fold Recognition Alignment Analyzer tool called Fralanyzer []. Fralanyzer receives as input a sequence-template alignment from FR servers, automatically searches annotated databases (such as PDBSum an […]

FRalanyzer institution(s)
Computer Science and Engineering Department, Buffalo, NY, USA
FRalanyzer funding source(s)
Supported by grants from the NIH and Genefun.

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