Frnakenstein statistics

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Frnakenstein specifications


Unique identifier OMICS_04758
Name Frnakenstein
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Python
Computer skills Advanced
Stability No
Maintained No


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Publication for Frnakenstein

Frnakenstein in publications

PMCID: 5123390
DOI: 10.1186/s12864-016-3105-4

[…] rnadistance [] between the structures 0 and 1, 0 and 2, and 1 and 2 are respectively 40, 96 and 86., for every pair of secondary structures, a set of twenty bi-stable sequences was generated with frnakenstein [], such that the best scoring sequence of each run was kept. for each pair of structures (s 1,s 2), and each sequence z designed on these structures, a complete binary tree t of depth 6 […]

PMCID: 4559319
PMID: 26335276
DOI: 10.1186/s12859-015-0706-x

[…] algorithm with the datasets of two, three, and four target structures and found that our algorithm shows better or comparable design performances compared with the previous algorithms, rnadesign and frnakenstein. in addition to the benchmarks with pseudoknot-free datasets, we benchmarked modena with two-target pseudoknot datasets and found that modena can design the rnas which have the target […]

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Frnakenstein institution(s)
Department of Statistics, University of Oxford, Oxford, UK

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