FTProd specifications


Unique identifier OMICS_22043
Name FTProd
Alternative name binding site comparison across multiple structures
Software type Package/Module
Interface Graphical user interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Medium
Stability Stable
Maintained Yes




No version available


  • person_outline Rommie Amaro

Additional information


Publication for binding site comparison across multiple structures

FTProd citations


An Introduction to B Cell Epitope Mapping and In Silico Epitope Prediction

J Immunol Res
PMCID: 5227168
PMID: 28127568
DOI: 10.1155/2016/6760830

[…] le proteins, are ideal for crystallography. However, the X-ray crystallography is limited by quality of cocrystals and electron density of the antibody []. Recently developed freely available program FTProd can be used as computational alternative to expensive and time consuming X-ray crystallography []. Nuclear magnetic resonance (NMR) has also potential to replace traditional X-ray crystallograp […]


Drug Like Protein–Protein Interaction Modulators: Challenges and Opportunities for Drug Discovery and Chemical Biology

Mol Inform
PMCID: 4160817
PMID: 25254076
DOI: 10.1002/minf.201400040

[…] d to pinpoint a region that can be explored by structure-based virtual screening approaches and for hotspot prediction while if multiple structures are available (or obtained via molecular dynamics), FTProd[] could be applied. In fact, it has been shown that when a main hotspot region at a protein–protein interface has a concave topology, with one or two additional hot-spots close enough to be rea […]

FTProd institution(s)
Department of Chemistry and Biochemistry, University of California San Diego, La Jolla, CA 92093, USA
FTProd funding source(s)
Supported by the National Institutes of Health (1-DP2-OD007237, in part).

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