FUGA specifications

Information


Unique identifier OMICS_12241
Name FUGA
Alternative name Functional Genomics Assistant
Software type Framework/Library
Interface Command line interface
Restrictions to use Academic or non-commercial use
Operating system Unix/Linux, Mac OS, Windows
Programming languages C++, MATLAB
License GNU General Public License version 3.0
Computer skills Advanced
Stability Stable
Maintained Yes

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  • person_outline Igt Drozdov <>

Publication for Functional Genomics Assistant

FUGA in publication

PMCID: 4300495
PMID: 25549968
DOI: 10.15252/msb.20145487

[…] their performance was not satisfactory, where the resulting network modularity scores q were significantly lower than that of the algorithm used in this study. these network operations were based on fuga (drozdov et al, ). network visualization was implemented by cytoscape v2.8.3 (http://www.cytoscape.org). the layered structure of the protein interaction network was decomposed with the k-core […]


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FUGA institution(s)
Cardiovascular Division - King’s College London BHF Centre of Research Excellence - School of Medicine - James Black Centre, London, UK; Centre for Bioinformatics - Department of Informatics - School of Natural & Mathematical Sciences, King’s College London, London, UK; Computational Genomics Unit, Institute of Agrobiotechnology - Centre for Research & Technology Hellas - Thessaloniki – Greece; Donnelly Centre for Cellular & Biomolecular Research, University of Toronto, Toronto, ON, Canada
FUGA funding source(s)
This project was supported by British Heart Foundation grant RE/08/003 and the Leducq Foundation. Early stages of this work have been supported in part by the Network of Excellence ENFIN (contract number LSHG-CT-2005-518254) funded by the European Commission.

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