Fun4Me specifications


Unique identifier OMICS_19592
Name Fun4Me
Software type Pipeline/Workflow
Interface Command line interface
Restrictions to use None
Input data Takes a query metagenomic dataset (of either short sequencing reads, or assemblies).
Output data Putative protein-coding genes or gene fragments, their putative functions in Gene Ontology (GO) terms or EC numbers, and possible metabolic pathways.
Operating system Unix/Linux
Programming languages C++, Python
License GNU General Public License version 3.0
Computer skills Advanced
Stability Stable
Maintained Yes



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  • person_outline Yuzhen Ye <>
  • person_outline Fatemeh Sharifi <>

Publication for Fun4Me

Fun4Me institution(s)
School of Informatics and Computing, Indiana University, Bloomington, IN, USA
Fun4Me funding source(s)
Supported by NIH grant 1R01AI108888 and NSF grant DBI-0845685.

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