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Protocols

FuncPatch specifications

Information


Unique identifier OMICS_06938
Name FuncPatch
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
Maintained Yes

Maintainer


  • person_outline G. Brian Golding

Publication for FuncPatch

FuncPatch citation

call_split

Structure Related Differences between Cytochrome Oxidase I Proteins in a Stable Heteroplasmic Mitochondrial System

2017
Genome Biol Evol
PMCID: 5726481
PMID: 29149282
DOI: 10.1093/gbe/evx235
call_split See protocol

[…] . The first of these is total amino acid diversity per site in the sample of eight sequences. The second and third relate to evolutionary conservation values derived using the programs ConSurf () and FuncPatch (). As an exploratory approach, root mean square distance values for atomic distances within superimposed COI structures including 1V54 were also calculated as the fourth constraint environm […]


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FuncPatch institution(s)
Department of Biology, McMaster University, Hamilton, ON, Canada

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