Modern sequencing technologies produce increasingly detailed data on genomic variation. However, conventional methods for relating either individual variants or mutated genes to phenotypes present known limitations given the complex, multigenic nature of many diseases or traits.…
Web app
G T A T C G C T A MutationTaster MutationTaster

MutationTaster

A free, web-based application for rapid evaluation of the disease-causing…

A free, web-based application for rapid evaluation of the disease-causing potential of DNA sequence alterations. MutationTaster integrates information from different biomedical databases and uses…

G T A T C G C T A database for… database for nonsynonymous SNPs' functional…

dbNSFP database for nonsynonymous SNPs' functional predictions

Provides a one-stop resource for functional predictions and annotations for…

Provides a one-stop resource for functional predictions and annotations for human nonsynonymous single-nucleotide variants (nsSNVs) and splice-site variants (ssSNVs), and facilitates the steps of…

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G T A T C G C T A Polymorphism… Polymorphism Phenotyping v2

PolyPhen-2 Polymorphism Phenotyping v2

Predicts possible impact of an amino acid substitution on the structure and…

Predicts possible impact of an amino acid substitution on the structure and function of a human protein using straightforward physical and comparative considerations. For a mutation, PolyPhen-2…

Web app
G T A T C G C T A Sorting Tolerant From… Sorting Tolerant From Intolerant

SIFT Sorting Tolerant From Intolerant

Predicts whether an amino acid substitution affects protein function. SIFT…

Predicts whether an amino acid substitution affects protein function. SIFT prediction is based on the degree of conservation of amino acid residues in sequence alignments derived from closely related…

Web app
G T A T C G C T A Protein ANalysis… Protein ANalysis THrough Evolutionary…

PANTHER Protein ANalysis THrough Evolutionary Relationships

A widely used online resource for comprehensive protein evolutionary and…

A widely used online resource for comprehensive protein evolutionary and functional classification, and includes tools for large-scale biological data analysis. The latest version of PANTHER, 10.0,…

Web app
G T A T C G C T A Variant Effect… Variant Effect Predictor

VEP Variant Effect Predictor

Determines the effect of your variants (SNPs, insertions, deletions, CNVs or…

Determines the effect of your variants (SNPs, insertions, deletions, CNVs or structural variants) on genes, transcripts, and protein sequence, as well as regulatory regions. Simply input the…

Web app
G T A T C G C T A Mutationassessor Mutationassessor

Mutationassessor

Predicts the functional impact of amino-acid substitutions in proteins, such as…

Predicts the functional impact of amino-acid substitutions in proteins, such as mutations discovered in cancer or missense polymorphisms. The functional impact is assessed based on evolutionary…

Desktop app
G T A T C G C T A Genomic Evolutionary… Genomic Evolutionary Rate Profiling

GERP Genomic Evolutionary Rate Profiling

Identifies constrained elements in multiple alignments by quantifying…

Identifies constrained elements in multiple alignments by quantifying substitution deficits.

Web app
G T A T C G C T A Screening for… Screening for Non-Acceptable Polymorphisms

SNAP Screening for Non-Acceptable Polymorphisms

A neural-network based tool to be used for the evaluation of functional effects…

A neural-network based tool to be used for the evaluation of functional effects single amino acid substitutions in proteins. SNAP utilizes various biophysical characteristics of the substitution, as…

Web app
G T A T C G C T A SNPdryad SNPdryad

SNPdryad

A computational method that can predict deleterious effect of amino acid…

A computational method that can predict deleterious effect of amino acid substitutions occurred in human proteins. SNPdryad outperforms other leading algorithms in accurately predicting deleterious…

Web app
G T A T C G C T A CONsensus… CONsensus DELeteriousness score of missense SNVs

Condel CONsensus DELeteriousness score of missense SNVs

A method to assess the outcome of non-synonymous SNVs using a consensus…

A method to assess the outcome of non-synonymous SNVs using a consensus deleteriousness score that combines various tools (MutationAssessor, FATHMM). The simplicity of Condel allows it to be easily…

Desktop app
G T A T C G C T A Cancer-specific… Cancer-specific High-throughput Annotation of…

CHASM/SNV-Box Cancer-specific High-throughput Annotation of Somatic Mutations

A software toolkit to prioritize SNVs based on their predicted contribution to…

A software toolkit to prioritize SNVs based on their predicted contribution to tumorigenesis. CHASM includes a database of pre-computed predictive features called SNVBox that facilitates rapid…

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G T A T C G C T A SnpEff SnpEff

SnpEff

A variant annotation and effect prediction tool. It annotates and predicts the…

A variant annotation and effect prediction tool. It annotates and predicts the effects of variants on genes (such as amino acid changes). SnpEff is really fast, it can calculate predictions for all…

Desktop app
G T A T C G C T A Multivariate Analysis… Multivariate Analysis of Protein Polymorphism

MAPP Multivariate Analysis of Protein Polymorphism

Quantifies the physicochemical variation in each column of a multiple sequence…

Quantifies the physicochemical variation in each column of a multiple sequence alignment and calculates the deviation of candidate amino acid replacements from this variation. The greater the…

Web app
G T A T C G C T A MutPred MutPred

MutPred

A web application tool developed to classify an amino acid substitution as…

A web application tool developed to classify an amino acid substitution as disease-associated or neutral in human. In addition, MutPred predicts molecular cause of disease. The tool requires a…

Desktop app
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G T A T C G C T A Predictor of human… Predictor of human Deleterious Single Nucleotide…

PhD-SNP Predictor of human Deleterious Single Nucleotide Polymorphisms

A method based on support vector machines (SVMs) that starting from the protein…

A method based on support vector machines (SVMs) that starting from the protein sequence information can predict whether a new phenotype derived from a nsSNP can be related to a genetic disease in…

Web app
G T A T C G C T A Align-GVGD Align-GVGD

Align-GVGD

A method that combines Grantham Variation (GV) and Grantham Deviation (GD)…

A method that combines Grantham Variation (GV) and Grantham Deviation (GD) scores to predict the transactivation activity of each missense substitution. We compared our predictions against…

Desktop app
G T A T C G C T A SiPhy SiPhy

SiPhy

Implements rigorous statistical tests to detect bases under selection from a…

Implements rigorous statistical tests to detect bases under selection from a multiple alignment data.

Web app
G T A T C G C T A Have yOur Protein… Have yOur Protein Explained

HOPE Have yOur Protein Explained

An easy-to-use web service that analyses the structural effects of a point…

An easy-to-use web service that analyses the structural effects of a point mutation in a protein sequence. Input your protein sequence and the mutation and HOPE will collect and combine available…

Web app
G T A T C G C T A Cancer-Related… Cancer-Related Analysis of Variants Toolkit

CRAVAT Cancer-Related Analysis of Variants Toolkit

A web-based application designed with an easy-to-use interface to facilitate…

A web-based application designed with an easy-to-use interface to facilitate the high-throughput assessment and prioritization of genes and missense alterations important for cancer tumorigenesis.…

Web app
G T A T C G C T A Structure SNP Structure SNP

StSNP Structure SNP

Provides practical, user friendly access to the wealth of information related…

Provides practical, user friendly access to the wealth of information related to nsSNPs by seamlessly connecting various databases into one pipeline. Key functional and structural information along…

Web app
G T A T C G C T A LS-SNP/PDB LS-SNP/PDB

LS-SNP/PDB

A web tool for genome-wide annotation of human SNPs. LS-SNP/PDB provides…

A web tool for genome-wide annotation of human SNPs. LS-SNP/PDB provides information useful for identifying amino-acid changing SNPs (nsSNPs) that are most likely to have an impact on biological…

Desktop app
G T A T C G C T A PriVar PriVar

PriVar

A cross-platform Java application toolkit to prioritize variants (SNVs and…

A cross-platform Java application toolkit to prioritize variants (SNVs and InDels) from exome or whole genome sequencing data by using different filtering strategies and information of external…

Desktop app
G T A T C G C T A Combined Annotation… Combined Annotation scoRing toOL

CAROL Combined Annotation scoRing toOL

A combined functional annotation score of non-synonymous coding variants. CAROL…

A combined functional annotation score of non-synonymous coding variants. CAROL combines information from PolyPhen-2 and SIFT. We use a weighted Z method to derive the combined score. We calibrate…

Web app
G T A T C G C T A Non-synonymous… Non-synonymous Enriched Coding muTation Archive

NECTAR Non-synonymous Enriched Coding muTation Archive

A database and web application to annotate disease-related and functionally…

A database and web application to annotate disease-related and functionally important amino acids in human proteins. A number of tools are available to facilitate the interpretation of DNA variants…

Web app
G T A T C G C T A Genomic position… Genomic position mapping to 3D data

G23D Genomic position mapping to 3D data

A tool for conversion of human genomic coordinates to protein coordinates and…

A tool for conversion of human genomic coordinates to protein coordinates and protein structures. G23D allows mapping of genomic positions/variants on evolutionary related (and not only identical)…

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G T A T C G C T A DeepSEA DeepSEA

DeepSEA

A deep learning-based algorithmic framework for predicting the chromatin…

A deep learning-based algorithmic framework for predicting the chromatin effects of sequence alterations with single nucleotide sensitivity. DeepSEA can accurately predict the epigenetic state of a…

Web app
G T A T C G C T A Mutation Detector Mutation Detector

MuD Mutation Detector

A Random Forests-based classifier that utilizes structural and sequence-derived…

A Random Forests-based classifier that utilizes structural and sequence-derived features to assess the impact of a given substitution on the protein function. MuD is unique in that user-reported…

Desktop app
G T A T C G C T A KinMutRF KinMutRF

KinMutRF

Identifies automatically pathogenic variants in human kinases. KinMutRF…

Identifies automatically pathogenic variants in human kinases. KinMutRF identifies disease-associated variants satisfactorily when trained and cross-validated with the 3689 human kinase variants from…

Desktop app
G T A T C G C T A phylogenetic P-values phylogenetic P-values

phyloP phylogenetic P-values

Computes conservation or acceleration p-values, either lineage-specific or…

Computes conservation or acceleration p-values, either lineage-specific or across all branches. phyloP was applied to multiple alignments of 36 species in the ENCODE regions and analyze patterns of…

Web app
G T A T C G C T A Integrating Molecular… Integrating Molecular Heuristics and Other Tools…

IMHOTEP Integrating Molecular Heuristics and Other Tools for Effect Prediction

Predicts the functional consequences of mutations of human pathogenetics.…

Predicts the functional consequences of mutations of human pathogenetics. IMHOTEP integrates nine popular prediction tools (PolyPhen-2, SNPs&GO, MutPred, SIFT, MutationTaster2, Mutation Assessor…

Web app
G T A T C G C T A NetDiseaseSNP NetDiseaseSNP

NetDiseaseSNP

A sequence conservation-based artificial neural network predictor which…

A sequence conservation-based artificial neural network predictor which classifies nsSNPs as disease-causing or neutral. NetDiseaseSNP uses the alignment generation algorithm of SIFT to identify…

Web app
G T A T C G C T A integrated Functional… integrated Functional inference of SNVs in human

iFish integrated Functional inference of SNVs in human

A server for assessing whether a missense mutation is pathogenic or neutral in…

A server for assessing whether a missense mutation is pathogenic or neutral in light of gene/gene family specific features and genetic evidences. iFish predicts the pathogenicity of nonsynonymous…

Web app
G T A T C G C T A wKinMut wKinMut

wKinMut

An integrated framework for the analysis and interpretation of the consequences…

An integrated framework for the analysis and interpretation of the consequences of variants in the human kinome. wKinMut web-server offers direct prediction of the potential pathogenicity of the…

Desktop app
Predicting regulatory… Predicting regulatory variant with composite…

PRVCS Predicting regulatory variant with composite statistic

An integrative resource for predictions from eight different tools on…

An integrative resource for predictions from eight different tools on functional annotation of noncoding variants. PRVCS is designed to predict and prioritize the regulatory variants by integrating…

Desktop app
G T A T C G C T A Checking for… Checking for Incorrect Sequence-Phenotype…

CHISPAs Checking for Incorrect Sequence-Phenotype Assignments

A software aimed to identify the DNA variants incorrectly assigned to a…

A software aimed to identify the DNA variants incorrectly assigned to a phenotype derived from both experimental errors and natural variations; we will refer to these as incorrect sequence-phenotype…

Web app
G T A T C G C T A Structural Mutation… Structural Mutation Annotation

StructMAn Structural Mutation Annotation

A web-based tool for annotation of human and non-human (non-synonymous) single…

A web-based tool for annotation of human and non-human (non-synonymous) single nucleotide variant (nsSNVs) in the structural context. StructMAn analyzes the spatial location of the amino acid residue…

Web app
G T A T C G C T A PinSnps PinSnps

PinSnps

A practical computational pipeline to readily perform data analyses of…

A practical computational pipeline to readily perform data analyses of protein-protein interaction networks (PPINs) by using genetic and functional information mapped onto protein structures. We…

Desktop app
G T A T C G C T A deltaBS deltaBS

deltaBS

A sequence analysis method for predicting whether genome variation is likely to…

A sequence analysis method for predicting whether genome variation is likely to result in phenotypic differences, and an application of the method across a variety of analysis scales. Unlike…

Web app
G T A T C G C T A PredictSNP PredictSNP

PredictSNP

Consensus classifiers for prediction of disease-related mutations. PredictSNP1…

Consensus classifiers for prediction of disease-related mutations. PredictSNP1 offers its users a consensus score based on the output of six different amino acid-based predictors. Because of the…

Desktop app
G T A T C G C T A KaKs Calculator KaKs Calculator

KaKs Calculator

Calculates nonsynonymous (Ka) and synonymous (Ks) substitution rates through…

Calculates nonsynonymous (Ka) and synonymous (Ks) substitution rates through model selection and model averaging. KaKs Calculator implements a set of candidate models in a maximum likelihood…

Web app
SCYPPred SCYPPred

SCYPPred

A web-server developed for predicting human cytochrome P450 SNPs (Single…

A web-server developed for predicting human cytochrome P450 SNPs (Single Nucleotide Polymorphisms) based on the SVM flanking sequence method. SCYPPred can yield the desired results by using the amino…

Web app
G T A T C G C T A mCSM-lig mCSM-lig

mCSM-lig

A structure-guided computational approach for quantifying the effects of…

A structure-guided computational approach for quantifying the effects of single-point missense mutations on affinities of small molecules for proteins. mCSM-lig uses graph-based signatures to…

Desktop app
G T A T C G C T A Frustration Frustration

Frustration

A framework in which index frustration, quantifying unfavorable local…

A framework in which index frustration, quantifying unfavorable local interactions, is employed as a metric to investigate the effects of single-nucleotide variants. The frustration index quantifies…

Desktop app
G T A T C G C T A yMap yMap

yMap

Analyses the impact of nsSNPs on protein level in yeast for the first time.…

Analyses the impact of nsSNPs on protein level in yeast for the first time. yMap provides users with the possibility to map their variant data to PTM containing residues and protein functional…

Desktop app
G T A T C G C T A Eigen Eigen

Eigen

An unsupervised spectral approach for scoring variants which does not make use…

An unsupervised spectral approach for scoring variants which does not make use of labeled training data. Eigen produces estimates of predictive accuracy for each functional annotation score, and…

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G T A T C G C T A Consensus Variant… Consensus Variant Effect Classification

CoVEC Consensus Variant Effect Classification

Integrates prediction whether non-synonymous variants are neutral or…

Integrates prediction whether non-synonymous variants are neutral or disease-causing from four methods. CoVEC offers a way to draw a consensus out of the prediction of four independent 3rd-party…

Desktop app
G T A T C G C T A Rare Exome Variant… Rare Exome Variant Ensemble Learner

REVEL Rare Exome Variant Ensemble Learner

Predicts the pathogenicity of missense variants on the basis of individual…

Predicts the pathogenicity of missense variants on the basis of individual tools: MutPred, FATHMM, VEST, PolyPhen, SIFT, PROVEAN, MutationAssessor, MutationTaster, LRT, GERP, SiPhy, phyloP, and…

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Desktop app
G T A T C G C T A PANTHER… PANTHER position-specific evolutionary…

PANTHER-PSEP PANTHER position-specific evolutionary preservation

A software tool for predicting non-synonymous genetic variants that may play a…

A software tool for predicting non-synonymous genetic variants that may play a causal role in human disease. Several previous variant pathogenicity prediction methods have been proposed that quantify…

Web app
G T A T C G C T A PON-P2 PON-P2

PON-P2

A powerful tool for screening harmful variants and for ranking and prioritizing…

A powerful tool for screening harmful variants and for ranking and prioritizing experimental characterization. PON-P2 is a machine learning-based classifier and groups the variants into pathogenic,…

Web app
G T A T C G C T A ENTropy and PRedIcted… ENTropy and PRedIcted protein StructurE

ENTPRISE ENTropy and PRedIcted protein StructurE

An algorithm for predicting human disease-associated amino acid substitutions…

An algorithm for predicting human disease-associated amino acid substitutions from sequence entropy and predicted protein structures. ENTPRISE is a boosted tree regression machine-learning approach…

Web app
G T A T C G C T A Mutation3D Mutation3D

Mutation3D

A functional prediction and visualization tool for studying the spatial…

A functional prediction and visualization tool for studying the spatial arrangement of amino acid substitutions on protein models and structures. Mutation3D is intended to be used to identify…

G T A T C G C T A Domain Mapping of… Domain Mapping of Disease Mutations

DMDM Domain Mapping of Disease Mutations

Provides an aggregated view of all human coding disease-related mutations and…

Provides an aggregated view of all human coding disease-related mutations and SNPs for each protein domain. To build DMDM, all human proteins were aligned to a database of conserved protein domains…

Web app
G T A T C G C T A M2SG M2SG

M2SG

An online database and interactive web server to (i) retrieve the mapped OMIM…

An online database and interactive web server to (i) retrieve the mapped OMIM and SwissVar variants for a given protein sequence; and (ii) obtain related proteins and mutations for an input disease…

G T A T C G C T A MutationAligner MutationAligner

MutationAligner

Enables you to explore mutation hotspots identified in protein domains from…

Enables you to explore mutation hotspots identified in protein domains from more than 5000 patients across 22 cancer types. Using multiple sequence analysis, protein domain hotspots are identified by…

Desktop app
G T A T C G C T A HMMvar-func HMMvar-func

HMMvar-func

A method for predicting the functional outcome of mutations in coding regions.…

A method for predicting the functional outcome of mutations in coding regions. The fine grained prediction provides richer information than current existing tools that can be especially useful for…

G T A T C G C T A Mitochondrial… Mitochondrial mutation Impact

MitImpact Mitochondrial mutation Impact

A collection of pre-computed pathogenicity predictions for all nucleotide…

A collection of pre-computed pathogenicity predictions for all nucleotide changes that cause non-synonymous substitutions in human mitochondrial protein coding genes. MitImpact presents itself as a…

Desktop app
G T A T C G C T A GEnomic Single… GEnomic Single nucleotide Polymorphism Analyzer

GESPA GEnomic Single nucleotide Polymorphism Analyzer

Predicts the pathogenicity and disease phenotype of nsSNPs. GESPA is a…

Predicts the pathogenicity and disease phenotype of nsSNPs. GESPA is a user-friendly software package for classifying disease association of nsSNPs. It allows flexibility in acceptable input formats…

Web app
G T A T C G C T A PATHiVAR PATHiVAR

PATHiVAR

Estimates the functional impact that mutations have over the human signalling…

Estimates the functional impact that mutations have over the human signalling network. PATHiVAR analyses VCF files, extract the deleterious mutations, locate them over the signalling pathways in the…

Web app
G T A T C G C T A Mutation position… Mutation position imaging toolbox interactive

MuPIT interactive Mutation position imaging toolbox interactive

A browser-based application for single-nucleotide variants (SNVs), which…

A browser-based application for single-nucleotide variants (SNVs), which automatically maps the genomic coordinates of SNVs onto the coordinates of available three-dimensional (3D) protein…

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G T A T C G C T A Structure-PPi Structure-PPi

Structure-PPi

Offers several functionalities to explore the consequence of protein mutations.…

Offers several functionalities to explore the consequence of protein mutations. It reports features that overlap the mutations, or that are in close physical proximity. The features reported include…

Web app
G T A T C G C T A dSysMap dSysMap

dSysMap

Displays Human disease-related mutations on the structural interactome. Mapping…

Displays Human disease-related mutations on the structural interactome. Mapping of mutations on protein structures and on interaction interfaces allows you to visualize the region of the interactome…

Desktop app
G T A T C G C T A GenomeGems GenomeGems

GenomeGems

Enables researchers to identify potential disease-causing SNPs in an efficient…

Enables researchers to identify potential disease-causing SNPs in an efficient manner. This enables rapid turnover of information and leads to further experimental SNP validation. GenomeGems allows…

Web app
G T A T C G C T A Mechismo Mechismo

Mechismo

Enables simultaneous consideration of thousands of 3D structures and…

Enables simultaneous consideration of thousands of 3D structures and biomolecular interactions to predict rapidly mechanistic consequences for mutations and modifications. Analysis of high-throughput…

Web app
G T A T C G C T A predicting Pathogenic… predicting Pathogenic small insertions and…
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G T A T C G C T A mCluster mCluster

mCluster

Represents an approach to identifying and elucidating protein mutations with…

Represents an approach to identifying and elucidating protein mutations with major consequences for protein function. This approach is distinct from and complementary to existing analysis methods…

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G T A T C G C T A Functional Analysis… Functional Analysis through Hidden Markov Models

FATHMM Functional Analysis through Hidden Markov Models

A high-throughput web-server capable of predicting the functional consequences…

A high-throughput web-server capable of predicting the functional consequences of both coding variants, i.e. non-synonymous single nucleotide variants (nsSNVs), and non-coding variants. To facilitate…

Web app
G T A T C G C T A PaPI PaPI

PaPI

A machine-learning approach to classify and score human coding variants by…

A machine-learning approach to classify and score human coding variants by estimating the probability to damage their protein-related function. PaPI combines Pseudo Amino Acid Composition (PseAAC),…

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G T A T C G C T A Evaluation of… Evaluation of Functional Impact of Nonsynonymous…

EFIN Evaluation of Functional Impact of Nonsynonymous SNPs

Predicts whether amino acids substitution would related to disease evaluated by…

Predicts whether amino acids substitution would related to disease evaluated by random forests based on protein conservation. Testing of this algorithm on a comprehensive dataset showed significant…

Web app
G T A T C G C T A Variant Modeller Variant Modeller

VarMod Variant Modeller

Utilises both protein sequence and structural features to predict nsSNVs that…

Utilises both protein sequence and structural features to predict nsSNVs that alter protein function. VarMod develops recent observations that functional nsSNVs are enriched at protein–protein…

G T A T C G C T A VariBench VariBench

VariBench

A benchmark database suite comprising variation datasets for testing and…

A benchmark database suite comprising variation datasets for testing and training methods for variation effect prediction. VariBench contains information for experimentally verified effects and…

Web app
G T A T C G C T A Detecting… Detecting disease-causing genetic variations due…

DDIG-Indel Detecting disease-causing genetic variations due to indels

A support vector machine-based method to prioritize non-frameshifting indels by…

A support vector machine-based method to prioritize non-frameshifting indels by comparing disease-associated mutations with putatively neutral mutations from the 1,000 Genomes Project. The final…

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G T A T C G C T A ASSEDA ASSEDA

ASSEDA

Predicts the effects of sequence changes that alter mRNA splicing in human…

Predicts the effects of sequence changes that alter mRNA splicing in human diseases. ASSEDA evaluates changes in splice site strength based on information theory-based models of donor and acceptor…

Web app
G T A T C G C T A Shannon pipeline Shannon pipeline

Shannon pipeline

A software tool for genome-scale mutation analysis and predicts variants…

A software tool for genome-scale mutation analysis and predicts variants affecting mRNA splicing. Individual information contents (in bits) of reference and variant splice sites are compared and…

Web app
G T A T C G C T A SNPs&GO SNPs&GO

SNPs&GO

An accurate method that, starting from a protein sequence, can predict whether…

An accurate method that, starting from a protein sequence, can predict whether a mutation is disease related or not by exploiting the protein functional annotation. The scoring efficiency of…

Desktop app
G T A T C G C T A Molecular… Molecular Evolutionary Genetics Analysis software…
Desktop app
G T A T C G C T A HMMvar HMMvar

HMMvar

A quantitative prediction method to predict the effect of genetic variation,…

A quantitative prediction method to predict the effect of genetic variation, both indels and SNPs, using hidden Markov models. Results show that HMMvar can achieve good performance in identifying…

Desktop app
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G T A T C G C T A Protein Variation… Protein Variation Effect Analyzer

PROVEAN Protein Variation Effect Analyzer

A software tool which predicts whether an amino acid substitution or indel has…

A software tool which predicts whether an amino acid substitution or indel has an impact on the biological function of a protein. PROVEAN is useful for filtering sequence variants to identify…

Desktop app
G T A T C G C T A MutationMotif Deprecated MutationMotif

MutationMotif

A package for analysis of mutation properties. Two different analysis…

A package for analysis of mutation properties. Two different analysis approaches are supported: (1) log-linear analysis of neighbourhood base influences on mutation coupled with a sequence logo like…

Curators for Variant effect prediction

  • Ka-Chun Wong's avatar image
    Ka-Chun Wong
    Department of Computer Science,…
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