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FunctionSIM specifications


Unique identifier OMICS_07809
Name FunctionSIM
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
Computer skills Advanced
Stability Stable
Maintained Yes


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FunctionSIM citation


Quantification of protein group coherence and pathway assignment using functional association

BMC Bioinformatics
PMCID: 3189934
PMID: 21929787
DOI: 10.1186/1471-2105-12-373

[…] localization. along with these, two datasets of interacting protein pairs from yeast and human were prepared details are described below. all the datasets are available at, we downloaded yeast pathways from the ftp site of the kyoto encyclopedia of genes and genomes (kegg) database []. this dataset consists of proteins in 101 pathways. the pathway size […]

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