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FunctionSIM specifications

Information


Unique identifier OMICS_07809
Name FunctionSIM
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
Computer skills Advanced
Stability Stable
Maintained Yes

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No version available

FunctionSIM citation

library_books

Quantification of protein group coherence and pathway assignment using functional association

2011
BMC Bioinformatics
PMCID: 3189934
PMID: 21929787
DOI: 10.1186/1471-2105-12-373

[…] localization. along with these, two datasets of interacting protein pairs from yeast and human were prepared details are described below. all the datasets are available at http://kiharalab.org/functionsim/., we downloaded yeast pathways from the ftp site of the kyoto encyclopedia of genes and genomes (kegg) database []. this dataset consists of proteins in 101 pathways. the pathway size […]


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