FunSeq specifications

Information


Unique identifier OMICS_08575
Name FunSeq
Software type Application/Script
Interface Command line interface
Restrictions to use None
Input format BED, VCF
Operating system Unix/Linux
Computer skills Advanced
Version 2.1.4
Stability Stable
Requirements sed, awk, grep, bedtools, tabix, VAT
Maintained Yes

Taxon


  • Primates
    • Homo sapiens

Versioning


Add your version

Maintainer


  • person_outline Mark Gerstein <>

Additional information


http://info.gersteinlab.org/Funseq2

Information


Unique identifier OMICS_08575
Name FunSeq
Interface Web user interface
Restrictions to use None
Input format BED, VCF
Computer skills Basic
Version 2.0
Stability Stable
Maintained Yes

Taxon


  • Primates
    • Homo sapiens

Maintainer


  • person_outline Mark Gerstein <>

Additional information


http://info.gersteinlab.org/Funseq2

Publications for FunSeq

FunSeq institution(s)
Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA; School of Life Science, Fudan University, Shanghai, China; Department of Computer Science and Engineering, The Chinese University of Hong Kong, Shatin, Hong Kong; Broad Institute of Harvard and MIT, Cambridge, MA, USA; Molecular Biophysics and Biochemistry Department, Yale University, New Haven, CT, USA
FunSeq funding source(s)
Supported by the National Institutes of Health, AL Williams Professorship, the Yale University Faculty of Arts and Sciences High Performance Computing Center (Grant Number RR029676-01) and the National Science Foundation - Graduate Research Fellowship Program (Grant Number 1346837).

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