Fusion-sense specifications

Information


Unique identifier OMICS_13289
Name Fusion-sense
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data DNA alignment file
Input format BAM
Output data Graph with the median decay rate calculation, Cumulative sensitivy distribution graph, Fusion sensitivity graph, List of genes that did not meet the expression threshold
Output format PNG, TXT
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Requirements
Java, Python, R, ggplot2, Plyr
Source code URL https://s3-us-west-2.amazonaws.com/mayo-bic-tools/fusion-sense/fusion-sense.src.tar.gz
Maintained Yes

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Documentation


Maintainer


  • person_outline Jaime Davila <>

Publication for Fusion-sense

Fusion-sense institution(s)
Department of Health Science Research, Mayo Clinic, Chinahester, MN, USA; Department of Health Science Research, Mayo Clinic, Chinahester, MN, USA; Department of Laboratory Medicine and Pathology, Mayo Clinic, Chinahester, MN, USA; Genome Analysis Core, Medical Genome Facility, Center for Individualized Medicine, Mayo Clinic, Chinahester, MN, USA
Fusion-sense funding source(s)
This was work was supported by internal funds from the Department of Laboratory Medicine and Pathology (DLMP) as well as by the Center for Individualized Medicine (CIM) at Mayo Clinic.

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