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G3data specifications


Unique identifier OMICS_19947
Name G3data
Interface Graphical user interface
Restrictions to use None
Operating system Windows
Programming languages C
License GNU General Public License version 2.0
Computer skills Medium
Version 1.5.3
Stability Stable
Maintained No




No version available



This tool is not maintained anymore.

G3data citations


A Model for an Angular Velocity Tuned Motion Detector Accounting for Deviations in the Corridor Centering Response of the Bee

PLoS Comput Biol
PMCID: 4858260
PMID: 27148968
DOI: 10.1371/journal.pcbi.1004887

[…] (0.1 to 0.6 c/deg) the detector presented here can provide a response that can be used for odometry by integrating the response over time., experimental data from ibbotson [] was extracted using the g3data tool and fitted with linear, logarithmic and exponential functions using the lm linear regression function in r [] version 3.1.3. errors introduced by use of the g3data tool are in all cases […]


The Biokinetic Spectrum for Temperature

PLoS One
PMCID: 4835062
PMID: 27088362
DOI: 10.1371/journal.pone.0153343

[…] growth rates or generation times in publications were transcribed manually into text files. legible figures displaying growth rates or generation times were digitized using the open source program g3data, available from https://github.com/pn2200/g3data. both tabular and digitised data were saved in the original units used within the publication. an r program was written to process the data, […]


Quantifying the Behavioural Relevance of Hippocampal Neurogenesis

PLoS One
PMCID: 4245232
PMID: 25426717
DOI: 10.1371/journal.pone.0113855

[…] symbols, or if the groups were plotted in separate panels or figures. only fifteen studies remained after applying the above criteria and the data were accurately extracted from the figures using g3data software (www.frantz.fi/software/g3data.php). two studies were subsequently excluded as over-plotting of points made it impossible to extract the data in one, and the control group was omitted […]


Can Serum Levels of Alkaline Phosphatase and Phosphate Predict Cardiovascular Diseases and Total Mortality in Individuals with Preserved Renal Function? A Systemic Review and Meta Analysis

PLoS One
PMCID: 4102523
PMID: 25033287
DOI: 10.1371/journal.pone.0102276

[…] age, may encumber the comparison between studies . newcastle-ottawa quality assessment scale (nos) was used for quality assessment. when hr or rr was presented only as graph, we used the software g3data (version 1.51, www.frantz.fi/software/g3data.php) to extract the estimates. any disagreements in the abstracted data were adjudicated by a third reviewer (y. x)., the number of individuals […]


Rethinking Transcriptional Activation in the Arabidopsis Circadian Clock

PLoS Comput Biol
PMCID: 4102396
PMID: 25033214
DOI: 10.1371/journal.pcbi.1003705

[…] based on a large number of experiments. to this end, we compiled time course data from the published literature, mainly by digitizing data points from figures using the free software package g3data . we extracted more than 11000 data points from 800 time courses in 150 different mutants or light conditions, from 59 different papers published between 1998 and 2013. the median time […]


Generalized in vitro in vivo relationship (IVIVR) model based on artificial neural networks

Drug Des Devel Ther
PMCID: 3615932
PMID: 23569360
DOI: 10.2147/DDDT.S41401

[…] total drug amount in the formulation. for both the in vitro and in vivo profiles, the average values reported in the published literature were used. most of the data was extracted from the graphs by g3data software using a simple point-and-click procedure. because of the manual nature of the above procedure, another member of the team rescanned approximately 5% of the randomly chosen profiles […]

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