[email protected] pipeline

[email protected] specifications

Information


Unique identifier OMICS_05996
Name [email protected]
Alternative name Mobyle
Interface Web user interface
Restrictions to use None
License GNU General Public License version 2.0
Computer skills Basic
Stability Stable
Maintained Yes

Maintainer


  • person_outline Catherine Letondal <>

Publication for [email protected]

[email protected] citations

 (3)
2014
PMCID: 4114554

[…] of c. 1.2 kb was amplified using kod polymerase, purified using a qiaquick pcr purification kit (qiagen) and cloned into pcr‐blunt ii topo (invitrogen)., phylogenetic analysis was performed using mobyle@pasteur platform from the institut pasteur ‘projets et développements en bioinformatique’ team and the ressource parisienne en bioinformatique structurale (http://mobyle.pasteur.fr). sequences […]

2011
PMCID: 3163572

[…] a similarity matrix to a distance matrix and calculating a tree rooted using leptospira interrogans as outgroup species with the upgma method using phylip 3.67 through the mobyle platform (http://mobyle.pasteur.fr/). a phylogenetic tree was then plotted using phylodraw (http://www.bioinformatics.org/wiki/phylodraw)., all proteins from all four brachyspira genomes in the analysis were compared […]

2010
PMCID: 2883569

[…] variability (or hypervariability). g + c content of the sequence is a strong predictor of minisatellite polymorphisms [44], and, since the slc6a3 sequence composition is cg bias (0.55, geecee of mobyle portal) it is likely that at least some of newly predicted repeats are polymorphic. the serv software [45] assessed the polymorphic potential of the predicted repeats by assigning the score […]

[email protected] institution(s)
Groupe Logiciels et Banques de Données, Institut Pasteur, Paris, France

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