GalaxyGemini protocols

View GalaxyGemini computational protocol

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Popular tool citations

chevron_left Homo-oligomer structure prediction chevron_right
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GalaxyGemini specifications

Information


Unique identifier OMICS_08429
Name GalaxyGemini
Interface Web user interface
Restrictions to use None
Input data PDB File
Computer skills Basic
Stability Stable
Maintained Yes

Maintainer


  • person_outline Chaok Seok <>

Publication for GalaxyGemini

GalaxyGemini in pipeline

2017
PMCID: 5372573
PMID: 28273846
DOI: 10.3390/ijms18030557

[…] using profunc []. the deconstruct [] and dali [] were employed to detect the aligned regions of proteins based on structural similarities. the oligomeric state of the structure was predicted using galaxygemini [], with subsequent energy minimization. all structure visualization was performed using ucsf chimera [] and pymol v.099rc6 (http://www.pymol.org)., coach [] was used to predict […]


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GalaxyGemini in publication

PMCID: 5372573
PMID: 28273846
DOI: 10.3390/ijms18030557

[…] have indicated that the homodimeric dlcs in s. mansoni [] and f. hepatica [] were composed of two asymmetric monomers through β-sheet interactions. the homodimer of cstegu20.6 was constructed using galaxygemini [] with only the c chain of dlc1 (pdb id: 4ds1_c), although the fifth β-strand (indicated with a dotted circles) as a monomeric counterpart was missed in the predicted structure [] (c). […]


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GalaxyGemini institution(s)
Department of Chemistry, Seoul National University, Seoul, Korea

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