Tool stats & trends
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|Interface||Web user interface|
|Restrictions to use||None|
|Input data||A SEQ file in the FASTA|
- person_outline Chaok Seok
Publication for GalaxyTBM
An Escherichia coli Strain, PGB01, Isolated from Feral Pigeon Faeces, Thermally Fit to Survive in Pigeon, Shows High Level Resistance to Trimethoprim
[…] 76) using CLUSTAL W  was done to identify the altered residues.Three-dimensional protein model of PGB01-DfrA7 (Ac.No. CBH31027) was generated by using homology modeling approach. Model was made via GalaxyTBM . Five templates (PDB ID: 3TQ8, 1ZDR, 3DAU, 3IA4 and 3IX9) with sequence identity of 6–29% to the target were selected by the GalaxyTBM pipeline and additionally structure was refined by u […]
Molecular Characterization of msp2/p44 of Anaplasma phagocytophilum Isolated from Infected Patients and Haemaphysalis longicornis in Laizhou Bay, Shandong Province, China
[…] Protein tertiary structure prediction was performed using the program GalaxyTBM (http://galaxy.seoklab.org/), and the predicted results are shown in . The predicted results indicated that the MSP2 protein tertiary structures of the LZ-HGA-Agent isolate, the APH-HZ and t […]
GalaxyWEB server for protein structure prediction and refinement
[…] A flowchart of the GalaxyWEB structure prediction (GalaxyTBM) and refinement (GalaxyREFINE) procedure is shown in . First, candidates for templates are selected by rescoring HHsearch () results placing more weights on the secondary structure score for […]
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