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Associated diseases

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galign specifications

Information


Unique identifier OMICS_24204
Name galign
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Mac OS
Programming languages C++
Computer skills Advanced
Version 1.0
Stability Stable
Source code URL http://shahamlab.rockefeller.edu/galign/Source_codes_080112/
Maintained Yes

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Maintainer


  • person_outline Shai Shaham <>

Publication for galign

galign in publication

PMCID: 5084644
PMID: 27810909
DOI: 10.1083/jcb.201601083

[…] using the solexa genome analyzer (illumina) 36-bp single-end reads were obtained at 13× coverage of the c. elegans genome. we used three programs to analyze the sequence reads. maqgene, maq, and galign programs were individually used to align the sequence reads to the c. elegans genome and annotate snps (; ; ). we also aligned the sequence reads to the genome with the program bowtie, […]


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galign institution(s)
Laboratory of Developmental Genetics, The Rockefeller University, New York, NY, USA
galign funding source(s)
Supported in part by NIH grants R01 HD042680, R01 NS064273, and R01 HD052677.

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