GAM specifications

Information


Unique identifier OMICS_12727
Name GAM
Alternative name Genes And Metabolites
Interface Web user interface
Restrictions to use None
Input data The analysis takes as input differential expression (DE) tables for genes and/or metabolites between two conditions of interest containing all expressed genes (whether they are differentially expressed or not).
Output data The output is the most regulated metabolic subnetwork of size controlled by false discovery rate parameters. The subnetworks are then visualized online and also can be downloaded in Cytoscape format for subsequent processing.
Computer skills Basic
Stability Stable
Maintained Yes

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Maintainer


  • person_outline Alexey Sergushichev <>

Publication for Genes And Metabolites

GAM institution(s)
Computer Technologies Department, ITMO University, Saint Petersburg, Russia; Department of Pathology & Immunology, Washington University in St. Louis, St. Louis, MO, USA; Agios Pharmaceuticals, Cambridge, MA, USA; Goodman Cancer Research Centre, McGill University, Montreal, Canada; Department of Physiology, McGill University, Montreal, QC, Canada; General Metabolics, Winchester, MA, USA; Department of Immunometabolism, Max Planck Institute of Immunobiology and Epigenetics, Freiburg, Germany
GAM funding source(s)
Supported by Government of Russian Federation [074-U01]

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