GAMOLA2 specifications


Unique identifier OMICS_31361
Software type Application/Script
Interface Graphical user interface
Restrictions to use Academic or non-commercial use
Input format FASTA,GENBANK
Output data The annotated file and associated results data.
Operating system Unix/Linux
Programming languages Perl
Computer skills Medium
Stability Stable
Maintained Yes


No version available



  • person_outline Eric Altermann

Publication for GAMOLA2

GAMOLA2 citation


Toward Understanding Phage:Host Interactions in the Rumen; Complete Genome Sequences of Lytic Phages Infecting Rumen Bacteria

Front Microbiol
PMCID: 5723332
PMID: 29259581
DOI: 10.3389/fmicb.2017.02340

[…] ence database (update 11th January, 2017) containing 8321 virus genome sequences and the NCBI-nr database (January 2017 update), with an e-value threshold of 10−3. Annotations generated by Prokka and GAMOLA2 and additional BLAST searches were merged using Geneious R9 (Kearse et al., ). Transmembrane proteins, signal peptides and tRNA elements were identified by GAMOLA2 and Prokka. Predicted transm […]

GAMOLA2 institution(s)
AgResearch Limited, Grasslands Research Centre, Palmerston North, New Zealand; Riddet Institute, Massey University, Palmerston North, New Zealand; AgResearch Limited, Invermay Agricultural Centre, Mosgiel, New Zealand

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