GARM statistics

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Citations per year

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Popular tool citations

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Associated diseases

Associated diseases

GARM specifications


Unique identifier OMICS_01420
Alternative name Genome Assembler, Reconcilation and Merging
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Perl
Computer skills Advanced
Stability Stable
Maintained Yes


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Publication for Genome Assembler, Reconcilation and Merging

GARM in publication

PMCID: 5436433
PMID: 28521789
DOI: 10.1186/s13059-017-1213-3

[…] assemblies with a corresponding high-quality reference genome that would allow us to assess the results., in this work, we benchmarked seven assembly reconciliation tools, namely cisa, gaa, gam_ngs, garm, metassembler, mix, and zorro, which are briefly described next. table summarizes the main goals and features of the seven assembly reconciliation tools. several of these algorithms use […]

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GARM institution(s)
Unidad Universitaria de Apoyo Bioinformatico, Universidad Nacional Autonoma de Mexico, Cuernavaca, Mexico

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