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GAzer specifications

Information


Unique identifier OMICS_18762
Name GAzer
Alternative name Gene set AnalyZER
Software type Application/Script
Interface Graphical user interface
Restrictions to use None
Input data Two tab-delimited text files (a gene expression data file and a class information file containing the class identifiers) to identify two groups.
Input format TSV
Operating system Unix/Linux, Windows
Programming languages R
Computer skills Medium
Stability No
Maintained No

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Publication for Gene set AnalyZER

library_books

GAzer: gene set analyzer.

2007 Bioinformatics
PMID: 17468122
DOI: 10.1093/bioinformatics/btm144

GAzer in publications

 (30)
PMCID: 5903980
PMID: 29681746
DOI: 10.1270/jsbbs.17097

[…] l. alexandrae and l. nobilissimum contributed to produce oriental hybrid lilies. the production of these hybrid lilies is one of flower breeding’s greatest achievements. the oriental hybrid ‘star gazer’ is the most important historical cultivar in this group because this is the first cultivar with an upright flower direction in oriental hybrid lilies (). modern lily breeding aimed […]

PMCID: 5808343
PMID: 29467703
DOI: 10.3389/fpsyg.2018.00093

[…] to the social relevance of gaze. it shows features distinct from that of non-social central attentional cues (), and it is modulated by social context such as the perceived intentionality of the gazer (, ; ). also, gaze-induced joint attention recruits brain areas putatively involved in “theory of mind” (), such as superior temporal sulcus and intraparietal sulcus (; ) in addition to brain […]

PMCID: 5678184
PMID: 29118362
DOI: 10.1038/s41598-017-14919-3

[…] controls (see supplementary table  for full descriptions of the samples) viewed photographs of a person gazing at various target locations on a partially transparent surface, situated between the “gazer” and the camera. participants judged where on this continuous 2-dimensional surface the gazer was looking (fig. ). on most trials (blocks 2–5), this surface was colored a uniform gray, offering […]

PMCID: 5822348
PMID: 28944994
DOI: 10.1002/mbo3.538

[…] and mcyd under laboratory conditions. while the virioplankton size fraction or the picocyanobacterium s. elongatus resulted in increased mcyb and mcyd transcription, the presence of the mixotrophic gazer o. danica resulted in decreased or unchanged transcription levels of those genes. based on our observations, we do not deem cyanobacteria suitable tools for the biological control of toxic […]

PMCID: 5816126
PMID: 29497223
DOI: 10.1007/s10919-017-0262-3

[…] hypotheses on the speaker’s and listeners’ eye gazes in l2 conversations, we conducted an anova test to investigate the statistical differences between languages, conversation topics, gaze channels (gazer-target pairs), and floor apportionment conditions (floor-hold or floor-switch). the detailed results of the anova test are given in “appendix ”, and the excerpted results directly related […]


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GAzer institution(s)
Korean BioInformation Center, KRIBB, Daejeon, Korea; Department of Applied Statistics, Yonsei University, Seoul, Korea; Molecular Virology Division, St. Luke’s-Roosevelt Hospital Center, New York, NY, USA; Human Genomics Laboratory, Genome Research Center, KRIBB, Daejeon, Korea
GAzer funding source(s)
Supported in part by KRIBB Research Initiative Program and 21c Frontier Functional Human Genome Project, Korea.

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