GBS barcode splitter specifications

Information


Unique identifier OMICS_01050
Name GBS barcode splitter
Software type Application/Script, Package/Module
Interface Command line interface
Restrictions to use None
Biological technology Illumina
Operating system Unix/Linux
Programming languages Perl
Computer skills Advanced
Stability Stable
Maintained Yes

Versioning


No version available

GBS barcode splitter citation

library_books

The Terpene Synthase Gene Family of Carrot (Daucus carota L.): Identification of QTLs and Candidate Genes Associated with Terpenoid Volatile Compounds

2017
Front Plant Sci
PMCID: 5684173
PMID: 29170675
DOI: 10.3389/fpls.2017.01930

[…] ybridization kinetics resulting in reduction of abundant fragments. After sequencing, GBS reads were de-multiplexed according to the sample barcodes and sequencing adapter remnants were removed using GBS barcode splitter. Reads were trimmed by base Phred quality (Q score < 20) and reads with a final length shorter than 20 base pairs were discarded before mapping and SNP calling.We downloaded the c […]

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