Genotyping by sequencing data analysis software tools

Genotyping by sequencing data analysis software tools Genotyping by sequencing (GBS) is a next generation sequencing based method that takes advantage of reduced representation to enable high throughput genotyping of large numbers of individuals at a large number of SNP markers. The relatively straightforward, robust, and cost-effective GBS protocol is currently being applied in numerous species by a large number of researchers.

Data preprocessing

Data processing

Sequence alignment

Genome variant analysis

Annotation

Genome-wide association study/Linkage/QTL

Workflows

Unclassified tools