GCOD specifications


Unique identifier OMICS_04092
Alternative name GeneChip Oncology Database
Restrictions to use None
Database management system Oracle
Community driven No
Data access File download, Browse
User data submission Not allowed
Maintained No


  • Primates
    • Homo sapiens

Publication for GeneChip Oncology Database

GCOD citations


The Evolution of Polymer Composition during PHA Accumulation: The Significance of Reducing Equivalents

PMCID: 5590436
PMID: 28952499
DOI: 10.3390/bioengineering4010020

[…] < 0.998). This time point was selected for consistent comparison between runs as all accumulations had reached at least 98% of plateau PHA content by this time. Likewise, plots of active biomass (in gCOD X) versus time were represented by linear regression to a linear quadratic equation, and the yield (YX/S) in gCOD X/gCOD S at 20 h was determined. The 95% confidence intervals associated with all […]


eXframe: reusable framework for storage, analysis and visualization of genomics experiments

BMC Bioinformatics
PMCID: 3235155
PMID: 22103807
DOI: 10.1186/1471-2105-12-452

[…] over 10,000 experiments annotated with disease states and organism parts with terms from controlled vocabularies []; Oncomine - a web-based data management and mining platform for cancer datasets []; GCOD - GeneChip Oncology Database -which has curated human cancer datasets [] and Genevestigator, which provides annotation on variety of biological contexts [].Although structured annotation of sampl […]

GCOD institution(s)
Department of Biostatistics and Computational Biology, Dana-Farber Cancer Institute, Boston, MA, USA

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