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|Alternative name||Genome Database for Vaccinium|
|Restrictions to use||None|
|Data access||File download, Browse|
|User data submission||Not allowed|
Plants and Fungi
- Vaccinium macrocarpon
Genome scale examination of NBS encoding genes in blueberry
[…] Assembly and annotation of the blueberry genome v1 was downloaded from the Genome Database for Vaccinium (GDV, https://www.vaccinium.org). The complete set of NBS-encoding genes was identified in the draft genome of blueberry using a reiterative process. First, a set of NBS […]
Extension modules for storage, visualization and querying of genomic, genetic and breeding data in Tripal databases
[…] splay module provides the appropriate online data pages. These Tripal extension modules, along with the Tripal core module, have been used in the construction of the GDR, CottonGen, CSFL, CGD and the Genome Database for Vaccinium (https://www.vaccinium.org/). These open-source Tripal extension modules with usage documentation can be found in the Tripal organization’s GitHub repository. They can al […]
Generation and analysis of blueberry transcriptome sequences from leaves, developing fruit, and flower buds from cold acclimation through deacclimation
[…] es shorter than 120 nt were removed from the total assembled 454 sequences, leaving 87,071 unique 454 transcript sequences, which were analyzed using the online SSR tool (SSR Server) available at the Genome Database for Vaccinium (GDV, http://www.vaccinium.org). SSR Server identifies simple sequence repeats using user-specified motif parameters and generates an EXCEL file containing the identified […]
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