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Gecko specifications

Information


Unique identifier OMICS_00758
Name Gecko
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Maintained Yes

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Maintainer


  • person_outline Joachim Theilhaber <>

Publication for Gecko

Gecko in publications

 (2)
PMCID: 1189078
PMID: 15985174
DOI: 10.1186/1471-2105-6-161

[…] [] for the go annotation and the detection of significantly overrepresented terms using the fdr. it also includes a function combining k-means clustering and fisher's exact test. gepas [] and gecko [] are two recently introduced large software packages that include functional analysis and visualization steps. in contrast to fact they are focused on the initial statistical evaluation […]

PMCID: 1160161
PMID: 15980569
DOI: 10.1093/nar/gki400

[…] process and analyze these large amounts of datasets, software packages for each of these areas have been developed in recent years [e.g. artemis () and ergo () for genome annotation or base () and gecko () for gene expression data analysis]. approaches to link and integrate data originating from these different areas have also been found to be a useful means for collecting new knowledge […]

Gecko institution(s)
Cambridge Genomics Center, Sanofi-Aventis, Cambridge, USA

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