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GelCompar specifications

Information


Unique identifier OMICS_08242
Name GelCompar
Alternative name GelCompar II
Software type Package/Module
Interface Graphical user interface
Restrictions to use License purchase required
Operating system Windows
License Commercial
Computer skills Medium
Version 6.6.11
Stability Stable
Maintained Yes

Versioning


No version available

Maintainer


  • person_outline GelCompar II Team

Additional information


A free trial is available on the site.

GelCompar citations

 (276)
library_books

Responses of Salt Marsh Plant Rhizosphere Diazotroph Assemblages to Drought

2018
PMCID: 5874641
PMID: 29543769
DOI: 10.3390/microorganisms6010027

[…] Gel analysis followed the methods of Davis et al. [,] and were accomplished using GelCompar II software (BioSystematica, Devonshire, UK). After analysis of the total bands for all samples, the bands were assigned an ultimate band number (UBN) [] for a total of 45 identified band po […]

library_books

Molecular Epidemiology of Staphylococcus epidermidis Implicated in Catheter Related Bloodstream Infections at an Academic Hospital in Pretoria, South Africa

2018
Front Microbiol
PMCID: 5845871
PMID: 29563910
DOI: 10.3389/fmicb.2018.00417

[…] roducts Incorporated, USA) and photographed with the UVP GelDoc-It system (Transilluminator, Ultra-violet Products Incorporated, USA). Pulsed-field gel electrophoresis patterns were analysed with the GelCompar II system (Applied Maths, Belgium) and the percentage of relatedness was determined by the Dice Coefficient. Isolates from IVC tips and BCs were considered genetically-related if the pulsoty […]

library_books

Phenotypic and molecular characterization of Klebsiella spp. isolates causing community acquired infections

2018
PMCID: 5913063
PMID: 29692906
DOI: 10.1016/j.nmni.2018.02.002

[…] The fingerprinting of all isolates was performed using pulsed-field gel electrophoresis , and the results were analysed by GelCompar II software (Applied Maths, Kortrijk, Belgium). K. pneumoniae multilocus sequence typing (MLST) was conducted in 21 selected isolates with different phenotypes: ESBL producers (two isolates […]

library_books

Halotolerant microbial consortia able to degrade highly recalcitrant plant biomass substrate

2018
Appl Microbiol Biotechnol
PMCID: 5847192
PMID: 29397428
DOI: 10.1007/s00253-017-8714-6

[…] been described (Brons and van Elsas ; Pereira e Silva et al. ). The DGGE was performed as reported by Cortes-Tolalpa et al. (). The DGGE patterns were then transformed to a band-matching table using GelCompar II software (Applied Maths, Sint Martens Latem, Belgium). […]

call_split

Rhizosphere Competence and Biocontrol Effect of Pseudomonas sp. RU47 Independent from Plant Species and Soil Type at the Field Scale

2018
Front Microbiol
PMCID: 5799239
PMID: 29449832
DOI: 10.3389/fmicb.2018.00097
call_split See protocol

[…] t age (sampling time), and the pathogen on the plate counts of RU47 were evaluated using three-way ANOVA (P ≤ 0.05) combined with Tukey post hoc test (P ≤ 0.05). DGGE fingerprints were evaluated with GELCOMPAR II version 6.5 (Applied Maths, Sint-Martens-Latem, Belgium) as described by . The Pearson correlation coefficient as a curve-based method was chosen to obtain pairwise similarities between f […]

library_books

Dissemination of Multidrug Resistant, Class I and II Integrons and Molecular Typing of CTX M producing Klebsiella pneumoniae

2018
PMCID: 5932916
PMID: 29744322
DOI: 10.4103/ijabmr.IJABMR_333_16

[…] The DNA fragment patterns were analyzed using Gelcompar II version 6.6 software (Applied maths, Belgium). The Dice coefficient was used to calculate similarities, and the unweighted paired group method based on the average linkages was used for c […]

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GelCompar institution(s)
Applied Maths, Laethem-Saint-Martin, Belgium

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