GelJ statistics

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Citations per year

Number of citations per year for the bioinformatics software tool GelJ
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Tool usage distribution map

This map represents all the scientific publications referring to GelJ per scientific context
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GelJ specifications

Information


Unique identifier OMICS_09757
Name GelJ
Software type Package/Module
Interface Graphical user interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages Java
License GNU General Public License version 2.0
Computer skills Medium
Stability Stable
Maintained Yes

Versioning


No version available

Maintainer


  • person_outline Myriam Zarazaga

Publication for GelJ

GelJ citations

 (4)
library_books

New Method for Differentiation of Granuloviruses (Betabaculoviruses) Based on Multitemperature Single Stranded Conformational Polymorphism

2017
Int J Mol Sci
PMCID: 5796033
PMID: 29283392
DOI: 10.3390/ijms19010083

[…] re transferring samples onto the gel, a 100 V × h 9 °C preelectrophoresis was performed. After electrophoresis, gels were stained using the Silver Stain Kit from BioVectis (Poland) and analyzed using GelJ software with default settings []. […]

library_books

Spread of resistant gram negatives in a Sri Lankan intensive care unit

2017
BMC Infect Dis
PMCID: 5506608
PMID: 28697755
DOI: 10.1186/s12879-017-2590-7

[…]  μl of molecular grade water (Invitrogen, USA) to a total volume of 25 μl. All reactions were performed at an annealing temperature of 36 °C for 1 min.All gel pictures captured were analyzed with the GelJ software downloaded from http://sourceforge.net/projects/gelj/ on 30/01/2016 []. Dendograms were drawn with Dice co-efficient for similarity calculations using UPGMA linkage. Tolerance levels wer […]

library_books

Acute and chronic gregarisation are associated with distinct DNA methylation fingerprints in desert locusts

2016
Sci Rep
PMCID: 5067648
PMID: 27752110
DOI: 10.1038/srep35608

[…] Bands were scored automatically as either present or absent by the Java program GelJ. Positions of loci are reported as molecular weights (base pairs). GelJ matches bands across different gel lanes based on a user-specified tolerance value (in base pairs) below which bands are co […]

library_books

Antifungal Susceptibility in Serum and Virulence Determinants of Candida Bloodstream Isolates from Hong Kong

2016
Front Microbiol
PMCID: 4767892
PMID: 26955369
DOI: 10.3389/fmicb.2016.00216

[…] (ChemiDoc Imaging System, Bio-Rad, USA) after staining with ethidium bromide. The bands of the isolates were analyzed and dendrogram was constructed by the unweighted pair group method in the program GelJ (Heras et al., ). […]


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GelJ institution(s)
Department of Mathematics and Computer Science, University of La Rioja, Ed. Vives. C/ Luís de Ulloa 2, Logroño, Spain; Biochemistry and Molecular Biology Area, University of La Rioja, Ed. Científico Tecnológico-CCT. C/ Madre de Dios, Logroño, Spain
GelJ funding source(s)
This work was partially supported by the Agencia de Desarrollo Económico de La Rioja (ADER) [2013-I-IDD-00123] and Ministerio de Economía y Competitividad [MTM2014-54151-P].

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