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GelQuest specifications

Information


Unique identifier OMICS_08245
Name GelQuest
Software type Application/Script
Interface Graphical user interface
Restrictions to use License purchase required
Input format ABI,SCF,BMP,TIFF,JPG,GIF,SGI,PCX,PCD,CUT,RLA,EPS
Output format XML,FSA,NEXUS,PHYLIP,NEWICK,FASTA
Operating system Windows
License Commercial
Computer skills Medium
Version 2.1.2
Stability Stable
Free trial Yes
Registration required Yes
Maintained Yes

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GelQuest citations

 (10)
library_books

Differential Effect of Newly Isolated Phages Belonging to PB1 Like, phiKZ Like and LUZ24 Like Viruses against Multi Drug Resistant Pseudomonas aeruginosa under Varying Growth Conditions

2017
Viruses
PMCID: 5707522
PMID: 29077053
DOI: 10.3390/v9110315

[…] eric-pcr were run on a 1.5% tbe-agarose gel at 80 v for 3 h at room temperature and visualized using the gelstudio sa system (analytik jena, jena, germany). dna fingerprint data were analyzed via gelquest and clustervis (http://www.sequentix.de/gelquest/help/index.html). for calculation of distance matrices the jaccard-index and for calculation of cluster trees the neighbor joining algorithm […]

library_books

Coexistence of metallo beta lactamase encoding genes in Pseudomonas aeruginosa

2017
PMCID: 5735570
PMID: 29205195
DOI: 10.4103/ijmr.IJMR_29_16

[…] at 52°c for one minute, primer extension at 65°c for eight minutes and final extension at 65°c for 16 min. atcc 27853 p. aeruginosa was used as control. eric-pcr analysis was performed using gelquest version 3.2.1 (digital dna processing, klein raden, germany) and sequentix (digital dna processing) and clustervis version 1.8.2 (digital dna processing). pearson phi coefficient […]

library_books

Characterization of polymorphic microsatellite markers for Primula sikkimensis (Primulaceae) using a 454 sequencing approach1

2016
Appl Plant Sci
PMCID: 4948899
PMID: 27437171
DOI: 10.3732/apps.1600015

[…] standard (applied biosystems, life technologies, waltham, massachusetts, usa). pcr products were subsequently run on an abi prism 3130 genetic analyzer (applied biosystems). genotypes were scaled by gelquest software (version 3.2.1; sequentix, klein raden, germany). seventeen of the 20 primers showed clear and robust genotype information. the microsatellite information and genbank accession […]

library_books

Molecular and phenotypic characterization of methicillin resistant Staphylococcus aureus isolates from a tertiary hospital in the Philippines

2016
PMCID: 4934148
PMID: 27398062
DOI: 10.1186/s41182-016-0003-z

[…] using agilent 2100 bioanalyzer (agilent technologists, usa). rapd fingerprints were analyzed using the sequentix—digital dna processing (germany). the lanes of the gel images were extracted using gelquest (sequentix, germany) and were transformed into a trace data curve. peaks were compared with base sizes from 110 to 1000 bp, and hyperbin width was 10 bp. the following parameters were taken: […]

library_books

Development of polymorphic microsatellite markers for Indian tobacco, Lobelia inflata (Campanulaceae)1

2014
Appl Plant Sci
PMCID: 4103137
PMID: 25202618
DOI: 10.3732/apps.1300096

[…] location and voucher deposition information). amplicon size was determined using a generuler 100-bp dna ladder (thermo fisher scientific). gel images for all samples were compared via sequentix gelquest (sequentix digital dna processing, klein raden, germany) from 3% agarose gel electrophoresis (run at 60 v for 90 min)., note: ta = annealing temperature., genetic diversity parameters […]

library_books

Development of chloroplast simple sequence repeats (cpSSRs) for the intraspecific study of Gracilaria tenuistipitata (Gracilariales, Rhodophyta) from different populations

2014
BMC Res Notes
PMCID: 3922622
PMID: 24490797
DOI: 10.1186/1756-0500-7-77

[…] and “0” (absence) based on the ssr pattern that was amplified by each primer-pair designed. these dna fingerprints of g. tenuistipitata specimens from different locations were constructed using gelquest software [] based on the size standard template abi genescan 50–500 and followed with similarity matrix cluster analysis based on the upgma (unweighted pair group method using arithmetic […]


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GelQuest institution(s)
SequentiX, Klein Raden, Germany

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