GEMBS specifications


Unique identifier OMICS_22376
Software type Pipeline/Workflow
Interface Command line interface
Restrictions to use None
Input data 1) a genome reference, 2) meta data describing the project, i.e. the layout of the sequence data (multiplex index, library, lanes per samples, samples per project) and 3) the sequence data.
Output data Some bigWig files.
Operating system Unix/Linux, Mac OS, Windows
Programming languages Python
License GNU General Public License version 3.0
Computer skills Advanced
Stability Stable
GCC, Samtools, Bcftools, Library gsl, Matplotlib, TeX Live, wigToBigWig
Maintained Yes



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  • person_outline Angelika Merkel <>
  • person_outline Marcos Fernandez-Callejo <>
  • person_outline Eloi Casals <>
  • person_outline Santiago Marco-Sola <>
  • person_outline Ronald Schuyler <>

Additional information

Publication for GEMBS

GEMBS institution(s)
Centro Nacional de Análisis Genómico (CNAG-CRG), Barcelona, Spain

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