GEMBS specifications

Information


Unique identifier OMICS_22376
Name GEMBS
Software type Pipeline/Workflow
Interface Command line interface
Restrictions to use None
Input data 1) a genome reference, 2) meta data describing the project, i.e. the layout of the sequence data (multiplex index, library, lanes per samples, samples per project) and 3) the sequence data.
Output data Some bigWig files.
Operating system Unix/Linux, Mac OS, Windows
Programming languages Python
License GNU General Public License version 3.0
Computer skills Advanced
Stability Stable
Requirements GCC, Samtools, Bcftools, Library gsl, Matplotlib, TeX Live, wigToBigWig
Maintained Yes

Download


Versioning


Add your version

Maintainers


  • person_outline Angelika Merkel <>
  • person_outline Marcos Fernandez-Callejo <>
  • person_outline Eloi Casals <>
  • person_outline Santiago Marco-Sola <>
  • person_outline Ronald Schuyler <>

Additional information


http://statgen.cnag.cat/gemBS/

Publication for GEMBS

GEMBS institution(s)
Centro Nacional de Análisis Genómico (CNAG-CRG), Barcelona, Spain

GEMBS reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review GEMBS