GeMInA specifications

Information


Unique identifier OMICS_26473
Name GeMInA
Alternative name Genomic Metadata for Infections Agents
Restrictions to use None
Community driven No
Data access File download, Browse
User data submission Not allowed
Content license CCO
Maintained No

Maintainer


This tool is not maintained anymore.

Publications for Genomic Metadata for Infections Agents

GeMInA citations

 (2)
library_books

New Genomic Insights into “Entotheonella” Symbionts in Theonella swinhoei: Mixotrophy, Anaerobic Adaptation, Resilience, and Interaction

2016
Front Microbiol
PMCID: 4996862
PMID: 27610106
DOI: 10.3389/fmicb.2016.01333

[…] closely related to the two known “Entotheonella” phylotypes/species, respectively (). Based on the correlation Z-score to all published whole and draft genomes, bin v4.2 and “Candidatus Entotheonella gemina” TSY2 (hereafter TSY2) had a Z-Score of 0.995, while the Z-score between bin v4.3 and “Candidatus Entotheonella factor” TSY1 (hereafter TSY1) reached 0.996. A Z-score >0.989 suggested two strai […]

library_books

Comprehensive DNA Signature Discovery and Validation

2007
PLoS Comput Biol
PMCID: 1868776
PMID: 17511514
DOI: 10.1371/journal.pcbi.0030098

[…] ies for any set of target genomes in the database, and displays results in the context of genome annotations for enhanced understanding and analysis. In addition, Insignia is closely coupled with the Gemina database (http://gemina.tigr.org), which provides sequence and annotation data for all bacterial, archaeal, and viral genomes available from GenBank, along with genotypic and epidemiological in […]

GeMInA institution(s)
Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD, USA; National Center for Biotechnology Information, Bethesda, MD, USA; University of Pittsburgh School of Medicine, Division of Infectious Diseases, Pittsburgh, PA, USA; University of Liverpool, School of Biological Sciences, Liverpool, UK
GeMInA funding source(s)
Supported by US Department of Homeland Security Science and Technology Directorate. [W81XWH-05-2-005, NBCH2070002].

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