Protocols

Geminivirus data warehouse specifications

Information


Unique identifier OMICS_18140
Name Geminivirus data warehouse
Restrictions to use None
Database management system MySQL
Community driven No
Data access Browse
User data submission Not allowed
Version 1.3
Maintained No

Maintainer


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Publication for Geminivirus data warehouse

Geminivirus data warehouse citation

call_split

Rebound of Cotton leaf curl Multan virus and its exclusive detection in cotton leaf curl disease outbreak, Punjab (India), 2015

2017
Sci Rep
PMCID: 5727119
PMID: 29234082
DOI: 10.1038/s41598-017-17680-9
call_split See protocol

[…] ruct complete genomes. Integrity of the ORFs in the genome sequences were checked using the NCBI ORFfinder algorithm (www.ncbi.nlm.nih.gov/orffinder/) and the Fangorn-Forest method implemented in the Geminivirus Data warehouse server (http://geminivirus.org:8080/geminivirusdw/). Sequences were then BLAST searched to identify and retrieve homologous sequences submitted in the GenBank. Additional Ge […]

Geminivirus data warehouse institution(s)
Departamento de Informática, Universidade Federal de Viçosa, Viçosa, Brazil; National Institute of Science and Technology in Plant-Pest Interactions/ BIOAGRO, Universidade Federal de Viçosa, Viçosa, Brazil; Núcleo de Biomoléculas, Universidade Federal de Viçosa, Viçosa, MG, Brazil; Departamento de Bioquímica e Biologia Molecular, Universidade Federal de Viçosa, Viçosa, Brazil; Departamento de Zootecnia, Universidade Federal de Viçosa, Viçosa, Brazil; Departamento de Solos, Universidade Federal de Viçosa, Viçosa, Brazil; Departamento de Biologia Geral, Universidade Federal de Viçosa, Viçosa, Brazil; Departamento de Fitopatologia, Universidade Federal de Viçosa, Viçosa, MG, Brazil; Departamento de Engenharia de Produção, Universidade Federal Fluminense, Petrópolis, Rio de Janeiro, Brazil
Geminivirus data warehouse funding source(s)
Supported by the National Institute of Science and Technology in Plant-Pest Interactions (INCT-IPP), Fundação de Amparo à Pesquisa do estado de Minas Gerais (FAPEMIG), Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES) and Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq).

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