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GEMS Launcher specifications


Unique identifier OMICS_26687
Name GEMS Launcher
Software type Toolkit/Suite
Interface Web user interface
Restrictions to use License purchase required
Computer skills Basic
Stability Stable
Free trial Yes
Registration required Yes
Maintained Yes


  • person_outline GGA Team

Additional information GEMS Launcher is part of the Genomatix Software Suite.

GEMS Launcher citations


Naturally Occurring Deletion Mutants of the Pig Specific, Intestinal Crypt Epithelial Cell Protein CLCA4b without Apparent Phenotype

PLoS One
PMCID: 4608703
PMID: 26474299
DOI: 10.1371/journal.pone.0140050
call_split See protocol

[…] and aligned using Clustal Omega ( Potential conserved binding sites for transcription factors were determined by Genomatix ElDorado/Gene2Promoter and GEMS Launcher software packages (Genomatix, Munich, Germany), according to Wünsch and colleagues []. Repetitive elements identified by RepeatMasker ( were excluded from the […]


Bioinformatics Identification of Modules of Transcription Factor Binding Sites in Alzheimer's Disease Related Genes by In Silico Promoter Analysis and Microarrays

PMCID: 3090009
PMID: 21559189
DOI: 10.4061/2011/154325
call_split See protocol

[…] th Genomatix software (Munich/Germany). All promoter sequences are derived from the promoter sequence retrieval database ElDorado (Release 4.9, Human Genome NCBI build 37/hg19). The DiAlignTF task of GEMS Launcher was used to check for conserved TFBSs between the human and mouse APP promoter sequence (Matrix Family Library, Version 8.0, Vertebrates; Genomatix: 690 matrices from 162 families). The […]


Data recovery and integration from public databases uncovers transformation specific transcriptional downregulation of cAMP PKA pathway encoding genes

BMC Bioinformatics
PMCID: 2762058
PMID: 19828069
DOI: 10.1186/1471-2105-10-S12-S1

[…] stream from the transcription start site (TSS), automatically assigned to genes on the basis of 5' cap-site databases integrated into promoter identification program - were identified using Eldorado (gems launcher, Genomatix []) and the Genomatix Promoter Database. TFBS in the promoter regions were identified by using ModelInspector and the Genomatix Promoter Database, comprising a total of 519 ma […]


Production of the Novel Two Peptide Lantibiotic Lichenicidin by Bacillus licheniformis DSM 13

PLoS One
PMCID: 2727956
PMID: 19707558
DOI: 10.1371/journal.pone.0006788
call_split See protocol

[…] The GC content was determined on the Genomatix homepage using the GEMS launcher ( The potential chymotrypsin cleavage site in Licβ was observed using the Expasy PeptideCutter Tool ( […]


Stronger inflammatory/cytotoxic T cell response in women identified by microarray analysis

Genes Immun
PMCID: 2735332
PMID: 19279650
DOI: 10.1038/gene.2009.12

[…] cted using men as the control, and a false discovery rate (FDR) ≤ 4% was applied to identify differentially expressed genes. Microarray data mining was performed using BiblioSphere, Gene2Promoter and GEMS-Launcher applications of the Genomatix software suite, Gene Ontology (GO) classifications were performed using the BiblioSphere Biological Process filter. To identify potential Estrogen Response […]


An optimized procedure for the design and evaluation of Ecotilling assays

BMC Genomics
PMCID: 2586031
PMID: 18973671
DOI: 10.1186/1471-2164-9-510

[…] tic support.The effect of sequence variations on putative transcription factor binding sites can be assessed using SNPInspector, MatInspector [], ModelInspector [] and other tools from the Genomatix' GEMS Launcher.Possible effects on miRNA binding sites can be estimated with the web-tools TARGETSCAN [], PATROCLES [] and polymiRTS [].The potential functional relevance of the region surrounding an i […]


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GEMS Launcher institution(s)
Intrexon Bioinformatics Germany GmbH, Munich, Germany

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