GEMULA statistics

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Citations per year

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Associated diseases

Associated diseases

GEMULA specifications


Unique identifier OMICS_17639
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
Computer skills Advanced
Version 1.0
Stability Stable
Maintained Yes



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  • person_outline Geert Geeven <>

Publication for GEMULA

GEMULA in publications

PMCID: 5487754
PMID: 28500569
DOI: 10.1007/s10886-017-0844-x

[…] m. mendica were found to contain short chain ffas and triglycerides (comprised of fatty acids with 10 or less carbons) (williams et al. ), and glands of ground-nesting m. fortis, m. parallela, m. gemula, and m. xylocopoides contained triglycerides with fatty acids in the range of 1–16 carbons (cane and carlson ). our methodology for chemical analysis to examine lipids of two cavity-nesting […]

PMCID: 5369021
PMID: 28347313
DOI: 10.1186/s12918-017-0419-z

[…] simulations were conducted to study model behavior. on the basis of a human regulatory sub-network and accordingly simulated expression data of 900 target genes birte was compared to birta [], gemula [] and a hypergeometric test and further to other network reconstruction algorithms like aracne [], genie3 [] and genenet []. birte performed best in regulator activity predictions including […]

PMCID: 5303608
PMID: 28250767
DOI: 10.1155/2017/4827171

[…] regression-based methods on modeling the gene expression and dnd microarray data depends on the choice of model and predictors that will be used as the input []. reference [] proposed a method named gemula, which has a four-stage method based on lasso, used to identify and prioritize the synergistic interaction among predictors. reference [] has proposed a new method of identifying genes using […]

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GEMULA institution(s)
Department of Mathematics, Faculty of Sciences VU University, Amsterdam, Netherlands; Department of Molecular and Cellular Neurobiology, Center for Neurogenomics and Cognitive Research, Neuroscience Campus Amsterdam, VU University, Amsterdam, Netherlands
GEMULA funding source(s)
Supported by the Netherlands Organization for Scientific Research (NWO; CLS grant 635.100.008), the Center for Medical Systems Biology (CMSB) and the EU FP7 framework Health program SynSys (grant 242167).

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