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|Interface||Graphical user interface|
|Restrictions to use||None|
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Publication for GenAMap
Improved drug therapy: triangulating phenomics with genomics and metabolomics
[…] . This argues for simplification of the model variables at points distant from the phenotypic outcome, as well as elimination of factors that contribute only marginally. New software systems, such as GenAMAP have been developed specifically for this purpose. GenAMAP allows for integration of genomics, transcriptomics, and phenomics data accounting for differences in dataset structure when one uses […]
Structured association analysis leads to insight into Saccharomyces cerevisiae gene regulation by finding multiple contributing eQTL hotspots associated with functional gene modules
[…] We developed a software platform called GenAMap [,] that implements the full analysis pipeline of structured genome-phenome association analysis and provides tools to visualize the results from the analysis. The GFlasso analysis pipeline th […]
Enhancing the usability and performance of structured association mapping algorithms using automation, parallelization, and visualization in the GenAMap software system
[…] Kim for her input in the design of the GFlasso processing pipeline and Dr. Andrew Wei Xu, Harvard Medical School, for his help to incorporate the proximal gradient method optimization of GFlasso into GenAMap. […]
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