Genbank2sequin statistics

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Genbank2sequin specifications

Information


Unique identifier OMICS_24820
Name Genbank2sequin
Software type Application/Script
Interface Command line interface
Restrictions to use None
Input data A file with associated annotations.
Input format GenBank
Output data The files needed to submit the sequence to GenBank using sequin.
Output format FASTA+TBL
Operating system Unix/Linux
Programming languages Python
License GNU General Public License version 3.0
Computer skills Advanced
Stability Stable
Maintained Yes

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Maintainer


  • person_outline Koenraad Van Doorslaer <>

Genbank2sequin in publication

PMCID: 5877562
PMID: 29494509
DOI: 10.3390/ijms19030701

[…] (nc_001879) and spinacia oleracea (nc_002202)., the file resulting from the fine annotation of the plastome of khaya senegalensis (gb-format) was transferred to a draft sqn-file using the chlorobox-genbank2sequin-tool [] and edited using the sequin tool (v13.05; []). the error-corrected sqn-file was submitted to genbank. because gene content and order were the same in all species analyzed […]


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