GenDBE

[…] gene rapidly identified a 1.6-mb scaffold as containing a 49-kb bgc potentially involved in tropolone biosynthesis (table ). automatic gene prediction by augustus 3.0 and annotation within the gendbe platform revealed the presence of numerous genes with potential roles in secondary metabolism (supplementary fig. , supplementary table ). previous work has shown that the key steps of fungal […]

[…] cells were publicly released until recently, which puts a severe limitation on biotechnological research. two extended annotation systems and web-based tools, one for browsing eukaryotic genomes (gendbe) and one for viewing eukaryotic transcriptomes (sams), were established as the first step towards a publicly usable cho cell genome/transcriptome analysis platform. this is complemented […]

[…] by evidencemodeler. visualisation of gene predictions and further manual curation of data were performed using the in-house genome annotation system gendb [], modified for eukaryotic genomes (gendbe)., to investigate the chloroplast-specific features of m. neglectum, the chloroplast genome was compared with those of c. reinhardtii and n. gaditana (figure , additional file : figure s4). […]